sagemath · vbraun · Sep 21, 2025 · Aug 25, 2025 · Aug 26, 2025 · Aug 26, 2025
diff --git a/src/sage/algebras/finite_dimensional_algebras/meson.build b/src/sage/algebras/finite_dimensional_algebras/meson.build
@@ -3,6 +3,7 @@ py.install_sources(
   'all.py',
   'finite_dimensional_algebra.py',
   'finite_dimensional_algebra_element.pxd',
+  'finite_dimensional_algebra_element.pyx',
   'finite_dimensional_algebra_ideal.py',
   'finite_dimensional_algebra_morphism.py',
   subdir: 'sage/algebras/finite_dimensional_algebras',

diff --git a/src/sage/algebras/fusion_rings/meson.build b/src/sage/algebras/fusion_rings/meson.build
@@ -3,11 +3,15 @@ py.install_sources(
   'all.py',
   'f_matrix.py',
   'fast_parallel_fmats_methods.pxd',
+  'fast_parallel_fmats_methods.pyx',
   'fast_parallel_fusion_ring_braid_repn.pxd',
+  'fast_parallel_fusion_ring_braid_repn.pyx',
   'fusion_double.py',
   'fusion_ring.py',
   'poly_tup_engine.pxd',
+  'poly_tup_engine.pyx',
   'shm_managers.pxd',
+  'shm_managers.pyx',
   subdir: 'sage/algebras/fusion_rings',
 )
 

diff --git a/src/sage/algebras/letterplace/meson.build b/src/sage/algebras/letterplace/meson.build
@@ -2,7 +2,10 @@ py.install_sources(
   '__init__.py',
   'all.py',
   'free_algebra_element_letterplace.pxd',
+  'free_algebra_element_letterplace.pyx',
   'free_algebra_letterplace.pxd',
+  'free_algebra_letterplace.pyx',
+  'letterplace_ideal.pyx',
   subdir: 'sage/algebras/letterplace',
 )
 

diff --git a/src/sage/algebras/lie_algebras/meson.build b/src/sage/algebras/lie_algebras/meson.build
@@ -13,6 +13,7 @@ py.install_sources(
   'heisenberg.py',
   'lie_algebra.py',
   'lie_algebra_element.pxd',
+  'lie_algebra_element.pyx',
   'morphism.py',
   'nilpotent_lie_algebra.py',
   'onsager.py',

diff --git a/src/sage/algebras/meson.build b/src/sage/algebras/meson.build
@@ -8,10 +8,12 @@ py.install_sources(
   'cellular_basis.py',
   'clifford_algebra.py',
   'clifford_algebra_element.pxd',
+  'clifford_algebra_element.pyx',
   'cluster_algebra.py',
   'commutative_dga.py',
   'down_up_algebra.py',
   'exterior_algebra_groebner.pxd',
+  'exterior_algebra_groebner.pyx',
   'finite_gca.py',
   'free_algebra.py',
   'free_algebra_element.py',
@@ -24,6 +26,7 @@ py.install_sources(
   'jordan_algebra.py',
   'nil_coxeter_algebra.py',
   'octonion_algebra.pxd',
+  'octonion_algebra.pyx',
   'orlik_solomon.py',
   'orlik_terao.py',
   'q_commuting_polynomials.py',

diff --git a/src/sage/algebras/quatalg/meson.build b/src/sage/algebras/quatalg/meson.build
@@ -2,7 +2,9 @@ py.install_sources(
   '__init__.py',
   'all.py',
   'quaternion_algebra.py',
+  'quaternion_algebra_cython.pyx',
   'quaternion_algebra_element.pxd',
+  'quaternion_algebra_element.pyx',
   subdir: 'sage/algebras/quatalg',
 )
 

diff --git a/src/sage/arith/meson.build b/src/sage/arith/meson.build
@@ -4,12 +4,18 @@ py.install_sources(
   'all__sagemath_objects.py',
   'constants.pxd',
   'functions.pxd',
+  'functions.pyx',
   'long.pxd',
   'misc.py',
   'multi_modular.pxd',
+  'multi_modular.pyx',
   'numerical_approx.pxd',
+  'numerical_approx.pyx',
   'power.pxd',
+  'power.pyx',
   'rational_reconstruction.pxd',
+  'rational_reconstruction.pyx',
+  'srange.pyx',
   subdir: 'sage/arith',
 )
 

diff --git a/src/sage/calculus/meson.build b/src/sage/calculus/meson.build
@@ -6,11 +6,17 @@ py.install_sources(
   'expr.py',
   'functional.py',
   'functions.py',
+  'integration.pyx',
   'interpolation.pxd',
+  'interpolation.pyx',
+  'interpolators.pyx',
   'ode.pxd',
+  'ode.pyx',
   'predefined.py',
+  'riemann.pyx',
   'test_sympy.py',
   'tests.py',
+  'var.pyx',
   'wester.py',
   subdir: 'sage/calculus',
 )

diff --git a/src/sage/calculus/transforms/meson.build b/src/sage/calculus/transforms/meson.build
@@ -3,7 +3,9 @@ py.install_sources(
   'all.py',
   'dft.py',
   'dwt.pxd',
+  'dwt.pyx',
   'fft.pxd',
+  'fft.pyx',
   subdir: 'sage/calculus/transforms',
 )
 

diff --git a/src/sage/categories/examples/meson.build b/src/sage/categories/examples/meson.build
@@ -29,6 +29,7 @@ py.install_sources(
   'monoids.py',
   'posets.py',
   'semigroups.py',
+  'semigroups_cython.pyx',
   'semirings.py',
   'sets_cat.py',
   'sets_with_grading.py',

diff --git a/src/sage/categories/meson.build b/src/sage/categories/meson.build
@@ -1,6 +1,7 @@
 py.install_sources(
   '__init__.py',
   'action.pxd',
+  'action.pyx',
   'additive_groups.py',
   'additive_magmas.py',
   'additive_monoids.py',
@@ -22,13 +23,16 @@ py.install_sources(
   'cartesian_product.py',
   'category.py',
   'category_cy_helper.pxd',
+  'category_cy_helper.pyx',
   'category_singleton.pxd',
+  'category_singleton.pyx',
   'category_types.py',
   'category_with_axiom.py',
   'chain_complexes.py',
   'classical_crystals.py',
   'coalgebras.py',
   'coalgebras_with_basis.py',
+  'coercion_methods.pyx',
   'commutative_additive_groups.py',
   'commutative_additive_monoids.py',
   'commutative_additive_semigroups.py',
@@ -88,6 +92,7 @@ py.install_sources(
   'finitely_generated_semigroups.py',
   'function_fields.py',
   'functor.pxd',
+  'functor.pyx',
   'g_sets.py',
   'gcd_domains.py',
   'generalized_coxeter_groups.py',
@@ -137,6 +142,7 @@ py.install_sources(
   'magmatic_algebras.py',
   'manifolds.py',
   'map.pxd',
+  'map.pyx',
   'matrix_algebras.py',
   'metric_spaces.py',
   'modular_abelian_varieties.py',
@@ -145,6 +151,7 @@ py.install_sources(
   'monoid_algebras.py',
   'monoids.py',
   'morphism.pxd',
+  'morphism.pyx',
   'noetherian_rings.py',
   'number_fields.py',
   'objects.py',

diff --git a/src/sage/coding/codecan/meson.build b/src/sage/coding/codecan/meson.build
@@ -1,7 +1,9 @@
 py.install_sources(
   '__init__.py',
   'all.py',
+  'autgroup_can_label.pyx',
   'codecan.pxd',
+  'codecan.pyx',
   subdir: 'sage/coding/codecan',
 )
 

diff --git a/src/sage/coding/meson.build b/src/sage/coding/meson.build
@@ -2,9 +2,11 @@ py.install_sources(
   '__init__.py',
   'abstract_code.py',
   'ag_code.py',
+  'ag_code_decoders.pyx',
   'all.py',
   'bch_code.py',
   'binary_code.pxd',
+  'binary_code.pyx',
   'bounds_catalog.py',
   'channel.py',
   'channels_catalog.py',
@@ -26,6 +28,7 @@ py.install_sources(
   'guava.py',
   'hamming_code.py',
   'information_set_decoder.py',
+  'kasami_codes.pyx',
   'linear_code.py',
   'linear_code_no_metric.py',
   'linear_rank_metric.py',

diff --git a/src/sage/combinat/crystals/meson.build b/src/sage/combinat/crystals/meson.build
@@ -23,18 +23,22 @@ py.install_sources(
   'kirillov_reshetikhin.py',
   'kyoto_path_model.py',
   'letters.pxd',
+  'letters.pyx',
   'littelmann_path.py',
   'monomial_crystals.py',
   'multisegments.py',
   'mv_polytopes.py',
   'pbw_crystal.py',
   'pbw_datum.pxd',
+  'pbw_datum.pyx',
   'polyhedral_realization.py',
   'spins.pxd',
+  'spins.pyx',
   'star_crystal.py',
   'subcrystal.py',
   'tensor_product.py',
   'tensor_product_element.pxd',
+  'tensor_product_element.pyx',
   'virtual_crystal.py',
   subdir: 'sage/combinat/crystals',
 )

diff --git a/src/sage/combinat/designs/meson.build b/src/sage/combinat/designs/meson.build
@@ -9,16 +9,21 @@ py.install_sources(
   'database.py',
   'design_catalog.py',
   'designs_pyx.pxd',
+  'designs_pyx.pyx',
   'difference_family.py',
   'difference_matrices.py',
+  'evenly_distributed_sets.pyx',
   'ext_rep.py',
+  'gen_quadrangles_with_spread.pyx',
   'group_divisible_designs.py',
   'incidence_structures.py',
   'latin_squares.py',
   'orthogonal_arrays.py',
   'orthogonal_arrays_build_recursive.py',
+  'orthogonal_arrays_find_recursive.pyx',
   'resolvable_bibd.py',
   'steiner_quadruple_systems.py',
+  'subhypergraph_search.pyx',
   'twographs.py',
   subdir: 'sage/combinat/designs',
 )

diff --git a/src/sage/combinat/integer_lists/meson.build b/src/sage/combinat/integer_lists/meson.build
@@ -1,7 +1,9 @@
 py.install_sources(
   '__init__.py',
   'base.pxd',
+  'base.pyx',
   'invlex.pxd',
+  'invlex.pyx',
   'lists.py',
   'nn.py',
   subdir: 'sage/combinat/integer_lists',

diff --git a/src/sage/combinat/matrices/meson.build b/src/sage/combinat/matrices/meson.build
@@ -1,6 +1,7 @@
 py.install_sources(
   '__init__.py',
   'all.py',
+  'dancing_links.pyx',
   'dlxcpp.py',
   'hadamard_matrix.py',
   'latin.py',

diff --git a/src/sage/combinat/meson.build b/src/sage/combinat/meson.build
@@ -18,6 +18,7 @@ py.install_sources(
   'colored_permutations.py',
   'combinat.py',
   'combinat_cython.pxd',
+  'combinat_cython.pyx',
   'combination.py',
   'combinatorial_map.py',
   'composition.py',
@@ -27,7 +28,9 @@ py.install_sources(
   'core.py',
   'counting.py',
   'cyclic_sieving_phenomenon.py',
+  'debruijn_sequence.pyx',
   'decorated_permutation.py',
+  'degree_sequences.pyx',
   'derangements.py',
   'descent_algebra.py',
   'diagram.py',
@@ -37,7 +40,10 @@ py.install_sources(
   'e_one_star.py',
   'enumerated_sets.py',
   'enumeration_mod_permgroup.pxd',
+  'enumeration_mod_permgroup.pyx',
+  'expnums.pyx',
   'family.py',
+  'fast_vector_partitions.pyx',
   'finite_state_machine.py',
   'finite_state_machine_generators.py',
   'fqsym.py',
@@ -78,11 +84,14 @@ py.install_sources(
   'partition_kleshchev.py',
   'partition_shifting_algebras.py',
   'partition_tuple.py',
+  'partitions.pyx',
   'perfect_matching.py',
   'permutation.py',
   'permutation_cython.pxd',
+  'permutation_cython.pyx',
   'plane_partition.py',
   'q_analogues.py',
+  'q_bernoulli.pyx',
   'quickref.py',
   'ranker.py',
   'recognizable_series.py',
@@ -96,6 +105,7 @@ py.install_sources(
   'rsk.py',
   'schubert_polynomial.py',
   'set_partition.py',
+  'set_partition_iterator.pyx',
   'set_partition_ordered.py',
   'shard_order.py',
   'shifted_primed_tableau.py',
@@ -113,6 +123,7 @@ py.install_sources(
   'subsets_pairwise.py',
   'subword.py',
   'subword_complex.py',
+  'subword_complex_c.pyx',
   'super_tableau.py',
   'superpartition.py',
   'symmetric_group_algebra.py',

diff --git a/src/sage/combinat/posets/meson.build b/src/sage/combinat/posets/meson.build
@@ -6,10 +6,13 @@ py.install_sources(
   'd_complete.py',
   'elements.py',
   'forest.py',
+  'hasse_cython.pyx',
+  'hasse_cython_flint.pyx',
   'hasse_diagram.py',
   'hochschild_lattice.py',
   'incidence_algebras.py',
   'lattices.py',
+  'linear_extension_iterator.pyx',
   'linear_extensions.py',
   'mobile.py',
   'moebius_algebra.py',

diff --git a/src/sage/combinat/rigged_configurations/meson.build b/src/sage/combinat/rigged_configurations/meson.build
@@ -21,6 +21,7 @@ py.install_sources(
   'rigged_configuration_element.py',
   'rigged_configurations.py',
   'rigged_partition.pxd',
+  'rigged_partition.pyx',
   'tensor_product_kr_tableaux.py',
   'tensor_product_kr_tableaux_element.py',
   subdir: 'sage/combinat/rigged_configurations',

diff --git a/src/sage/combinat/root_system/meson.build b/src/sage/combinat/root_system/meson.build
@@ -4,6 +4,7 @@ py.install_sources(
   'ambient_space.py',
   'associahedron.py',
   'braid_move_calculator.py',
+  'braid_orbit.pyx',
   'branching_rules.py',
   'cartan_matrix.py',
   'cartan_type.py',
@@ -18,8 +19,10 @@ py.install_sources(
   'non_symmetric_macdonald_polynomials.py',
   'pieri_factors.py',
   'plot.py',
+  'reflection_group_c.pyx',
   'reflection_group_complex.py',
   'reflection_group_element.pxd',
+  'reflection_group_element.pyx',
   'reflection_group_real.py',
   'root_lattice_realization_algebras.py',
   'root_lattice_realizations.py',

diff --git a/src/sage/combinat/words/meson.build b/src/sage/combinat/words/meson.build
@@ -12,7 +12,9 @@ py.install_sources(
   'shuffle_product.py',
   'suffix_trees.py',
   'word.py',
+  'word_char.pyx',
   'word_datatypes.pxd',
+  'word_datatypes.pyx',
   'word_generators.py',
   'word_infinite_datatypes.py',
   'word_options.py',