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removed direct header access through file, uses user read header#1963

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jkbonfield merged 1 commit intosamtools:developfrom
vasudeva8:sample_upd
Oct 23, 2025
Merged

removed direct header access through file, uses user read header#1963
jkbonfield merged 1 commit intosamtools:developfrom
vasudeva8:sample_upd

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Fixes #1961
The samples used header in samFile which is improper; modified to use the header explicitly read.

@jkbonfield jkbonfield merged commit b08fcbf into samtools:develop Oct 23, 2025
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Some sample programs use htsFile struct members directly

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