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11 changes: 6 additions & 5 deletions src/search/ibf.cpp
Original file line number Diff line number Diff line change
Expand Up @@ -12,15 +12,16 @@
#include <tuple> // for get
#include <vector> // for vector

#include <seqan3/io/detail/misc.hpp> // for set_format
#include <seqan3/io/record.hpp> // for field, fields
#include <seqan3/io/sequence_file/record.hpp> // for sequence_record
#include <seqan3/search/kmer_index/shape.hpp> // for shape, ungapped
#include <seqan3/contrib/std/detail/adaptor_base.hpp> // for operator|
#include <seqan3/io/detail/misc.hpp> // for set_format
#include <seqan3/io/record.hpp> // for fields
#include <seqan3/io/sequence_file/record.hpp> // for sequence_record
#include <seqan3/search/kmer_index/shape.hpp> // for shape, ungapped

#include <hibf/interleaved_bloom_filter.hpp> // for interleaved_bloom_filter

#include <fpgalign/config.hpp> // for config
#include <fpgalign/contrib/minimiser_hash.hpp> // for minimiser_hash, operator==, operator|, minimiser_hash_fn
#include <fpgalign/contrib/minimiser_hash.hpp> // for minimiser_hash, operator==, minimiser_hash_fn
#include <fpgalign/contrib/slotted_cart_queue.hpp> // for slotted_cart_queue, assert, slot_id
#include <fpgalign/meta.hpp> // for meta, seqfile_t, record_t
#include <fpgalign/search/search.hpp> // for ibf
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