Update some GitHub Actions versions

.github/workflows/benchmark.yml

@@ -17,11 +17,11 @@ jobs:
     if: github.repository_owner == 'sgkit-dev'
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0  # To fetch all commits to be able to generate benchmarks html
       - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v5
         with:
           python-version: "3.10"
       - name: Install dependencies

.github/workflows/build-gpu.yml

@@ -20,7 +20,7 @@ jobs:
         python-version: ["3.10"]
 
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
 
       - name: Run Nvidia-smi
         run: |

.github/workflows/build-numpy-1.yml

@@ -14,17 +14,17 @@ jobs:
         python-version: ["3.10", "3.11"]
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
         pip install -r requirements-numpy1.txt -r requirements-numpy1-dev.txt
     # - name: Run pre-commit
-    #   uses: pre-commit/action@v2.0.0
+    #   uses: pre-commit/action@v3.0.1
     - name: Test with pytest and coverage
       run: |
         pytest -v --cov=sgkit --cov-report=term-missing

.github/workflows/build.yml

@@ -17,17 +17,17 @@ jobs:
         python-version: ["3.10", "3.11", "3.12"]
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
         pip install -r requirements.txt -r requirements-dev.txt
     - name: Run pre-commit
-      uses: pre-commit/action@v2.0.0
+      uses: pre-commit/action@v3.0.1
     - name: Test with pytest and coverage
       run: |
         pytest -v --cov=sgkit --cov-report=term-missing

.github/workflows/check-docs.yml

@@ -17,9 +17,9 @@ jobs:
         python-version: ["3.11"]
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install dependencies
@@ -30,7 +30,7 @@ jobs:
         pip install -r requirements.txt -r requirements-dev.txt -r requirements-doc.txt
         pip install -U dask distributed  # need latest versions to successully build docs
     - name: Run pre-commit
-      uses: pre-commit/action@v2.0.0
+      uses: pre-commit/action@v3.0.1
     - name: Check for Sphinx doc warnings
       run: |
         cd docs

.github/workflows/docs.yml

@@ -11,9 +11,9 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: "3.11"
     - name: Install dependencies

.github/workflows/upstream.yml

@@ -17,9 +17,9 @@ jobs:
         python-version: ["3.10", "3.11"]
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
 

.github/workflows/validation.yml

@@ -15,7 +15,7 @@ jobs:
     if: github.repository_owner == 'sgkit-dev'
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - uses: google-github-actions/setup-gcloud@v0
       with:
         project_id: ${{ secrets.GCP_PROJECT_ID }}

.github/workflows/wheels.yml

@@ -21,9 +21,9 @@ jobs:
         python-version: ["3.10"]
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v2
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
     - name: Install dependencies
@@ -50,13 +50,13 @@ jobs:
     runs-on: ${{ matrix.os }}
     steps:
       # checkout repo to subdirectory to get access to scripts
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
         with:
           path: sgkit-copy
       - name: Download artifacts
         uses: actions/[email protected]
       - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v5
         with:
           python-version: ${{ matrix.python-version }}
       - name: Install wheel and test
@@ -79,13 +79,13 @@ jobs:
         python-version: ["3.10"]
     steps:
       # checkout repo to subdirectory to get access to scripts
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
         with:
           path: sgkit-copy
       - name: Download artifacts
         uses: actions/[email protected]
       - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v5
         with:
           python-version: ${{ matrix.python-version }}
       - name: Install wheel and test

.github/workflows/windows.yml

@@ -17,7 +17,7 @@ jobs:
         python-version: ["3.10"]
 
     steps:
-    - uses: actions/checkout@v2
+    - uses: actions/checkout@v4
     - name: Set up Miniconda with Python version ${{ matrix.python-version }}
       uses: conda-incubator/setup-miniconda@v2
       with: