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Don't fail build if statsmodels not installable for tests #1321

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Don't fail build if statsmodels not installable for tests #1321

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13 changes: 3 additions & 10 deletions sgkit/tests/test_association.py
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Original file line number Diff line number Diff line change
@@ -1,4 +1,3 @@
import warnings
from pathlib import Path
from typing import Any, Dict, List, Optional, Sequence, Tuple

Expand All @@ -24,6 +23,9 @@

from .test_regenie import load_covariates, load_traits

sm = pytest.importorskip("statsmodels.api")
from statsmodels.regression.linear_model import RegressionResultsWrapper


def _dask_cupy_to_numpy(x):
if da.utils.is_cupy_type(x):
Expand All @@ -33,15 +35,6 @@ def _dask_cupy_to_numpy(x):
return x


with warnings.catch_warnings():
warnings.simplefilter("ignore", DeprecationWarning)
# Ignore: DeprecationWarning: Using or importing the ABCs from 'collections'
# instead of from 'collections.abc' is deprecated since Python 3.3,
# and in 3.9 it will stop working
import statsmodels.api as sm
from statsmodels.regression.linear_model import RegressionResultsWrapper


def _generate_test_data(
n: int = 100,
m: int = 10,
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