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Interpret U1 dtype as VCF Character #200

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Apr 22, 2025
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Interpret U1 dtype as VCF Character #200

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3 changes: 1 addition & 2 deletions vcztools/vcf_writer.py
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Original file line number Diff line number Diff line change
Expand Up @@ -623,14 +623,13 @@ def _array_to_vcf_number(category, key, a):


def _array_to_vcf_type(a):
# reverse of _vcf_type_to_numpy
if a.dtype == bool:
return "Flag"
elif np.issubdtype(a.dtype, np.integer):
return "Integer"
elif np.issubdtype(a.dtype, np.float32):
return "Float"
elif a.dtype.str == "|S1":
elif a.dtype.str[1:] in ("S1", "U1"):
return "Character"
elif a.dtype.kind in ("O", "S", "U"):
return "String"
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