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@t20100 t20100 released this 18 Jan 08:35
· 22 commits to 2.0 since this release
v2.0.0rc0
6c5e523

Release notes

This version of silx supports Python 3.7 to 3.12.
The silx.gui package supports PySide6, PyQt6 and PyQt5 (PySide2 is no longer supported).

⚠️ Breaking API change: silx.gui.plot.PlotWidget's add methods (i.e., addCurve, addImage, ...) returns the plot item object instance instead of its legend (#3996).

What's Changed

  • Dropped python 3.6 support, Removed CI for PySide2 by @t20100 in #3712
  • Port v1.1.0 PRs from 1.1 branch and bumps version to 1.2.0dev by @t20100 in #3711
  • 3713 bitshuffle decompression by @kif in #3714
  • Fix HDF5TableView virtual and external dataset information by @woutdenolf in #3717
  • skip if h5py is too old by @kif in #3722
  • Skipif on test rather than on fonction ... by @kif in #3723
  • CI: Use intel-opencl-icd package by @t20100 in #3727
  • Fixed support of pint >= 0.20 by @t20100 in #3725
  • silx.gui.plot: Fixed reset of interaction when closing mask tool by @t20100 in #3735
  • Dedicated function to parse gl version by @vallsv in #3733
  • silx.gui.plot: Fixed issue when PlotWidget has a size of 0 by @t20100 in #3736
  • Update rules by @kif in #3732
  • silx.gui: Fixed support of PySide6.4 enums by @t20100 in #3737
  • Fixed numpy, scipy, matplotlib deprecation warnings by @t20100 in #3741
  • Fix histogram visibility by @vallsv in #3742
  • Added pytest-mock to Debian build dependencies by @t20100 in #3740
  • h5todict errors argument bug by @woutdenolf in #3749
  • 3747 h5todict string issue by @woutdenolf in #3748
  • Update tutorials.rst by @kif in #3765
  • Fixed support of cython 3.0.0b1 by @t20100 in #3770
  • [silx view] Fixed support of NXData image with 0-length axis by @t20100 in #3768
  • Fixed build-deb.sh: Avoid to run Python from src/silx by @t20100 in #3772
  • Update PlotWidget.py by @payno in #3773
  • silx.math: Fix several function docstrings by @loichuder in #3774
  • Correct numpy 1.25 deprecation warnings by @vasole in #3777
  • close 3778 by @kif in #3779
  • Fixed silx.io.h5py_utils.retry by @t20100 in #3775
  • silx.opencl.codec : Added support of pyopencl's Buffer and Array to BitshuffleLz4.decompress by @t20100 in #3787
  • silx.gui.data: Fixed issue with hdf5 attributes string formatting by @t20100 in #3790
  • silx.gui.widget.UrlSelectionTable: Fixed exception with interaction, renamed get|setSelection to get|setUrlSelection by @t20100 in #3791
  • launcher: Better error message by @vallsv in #3793
  • silx.gui.dialog.ColormapDialog: Fixed ColormapDialog layout by @t20100 in #3792
  • ioutils: Supports recursive match "**" by @vallsv in #3795
  • color: Exception if vrange is not finite by @vallsv in #3794
  • gui: Expose silx dnd uri by @vallsv in #3796
  • silx.io.dictdump: Removed dicttoh5 overwrite_data argument by @t20100 in #3806
  • This test fails on edna site with a CPU device by @kif in #3809
  • Remove deprecated modules by @t20100 in #3804
  • Removed features deprecated since <=0.7.0 by @t20100 in #3798
  • Improve url selection by @vallsv in #3797
  • Removed features deprecated from v0.8 to v0.12 by @t20100 in #3799
  • silx.gui.plot.StackView: Removed setColormap autoscale argument by @t20100 in #3805
  • silx.opencl.common: Remove OpenCL.create_context useFp64 argument by @t20100 in #3801
  • Refactor app utils by @vallsv in #3811
  • Removed features deprecated from v0.13 to v0.15 by @t20100 in #3802
  • silx.gui.plot.items: Remove ImageDataAggregated all-NaN warning by @t20100 in #3786
  • silx.math.colormap: Added normalize function to normalize to uint8. by @t20100 in #3785
  • Remove unused imports by @t20100 in #3814
  • Drop support of PySide2 by @t20100 in #3784
  • silx.gui: Added a warning about pyOpenGL and Qt compatibility by @t20100 in #3738
  • silx.gui.qt: Updated PySide6 loadUi function by @t20100 in #3783
  • silx.gui.plot: Removed deprecated methods RegionOfInterest.get|setLabel by @t20100 in #3810
  • Remove python2 support by @t20100 in #3815
  • silx.opencl.backprojection: Remove deprecated fourier_filter function by @t20100 in #3816
  • silx.gui.data.DataView: Removed patch for pymca <v5.3.0 support by @t20100 in #3800
  • Debian12 by @kif in #3812
  • Fix url with slices by @vallsv in #3821
  • Urlselectiontable with 3 columns by @vallsv in #3822
  • silx.io.nxdata.parser: Fixed NXdata validation by @t20100 in #3782
  • silx.gui.plot: Deprecate PlotWidget's Curve and Image sequence-like access by @t20100 in #3803
  • [silx compare] Create a dedicated app to compare images by @vallsv in #3788
  • Polish image compare app by @vallsv in #3827
  • silx.opencl.convolution: Removed Python 2 compatible code by @t20100 in #3818
  • Replace OrderedDict by dict by @t20100 in #3830
  • Add NXnote to the list of describable classes by @alejandrohomsp in #3832
  • silx.gui.plot: Added margins argument to PlotWidget.setLimits by @t20100 in #3828
  • silx.gui.plot: Fixed ImageStack handling of visible state by @t20100 in #3834
  • silx.gui.plot: Fixed display of PlotWindow zoom in/out actions by @t20100 in #3837
  • silx.gui.plot: Added Plotwidget.get|setDefaultColors and updated default colors behavior by @t20100 in #3835
  • Removed copy of scipy's Delaunay from third_party by @t20100 in #3808
  • Remove code for support of fabio<0.9 by @t20100 in #3829
  • Update setup.py build configuration: Removed setup.py commands and options by @t20100 in #3831
  • Documentation: Added silx.gui.plot.items.roi base classes to documentation by @t20100 in #3839
  • silx.gui.colors, silx.gui.plot: Added indexed color names in rgba and PlotWidget by @t20100 in #3836
  • silx.gui.dialog: Fixed ColormapDialog state when updating Item by @t20100 in #3833
  • Fixed typo: 4 " quotes instead of 3. by @t20100 in #3838
  • Remove C header for Python 2 on Windows compatibilty by @t20100 in #3840
  • silx.third_party: Deprecated EdfFile and TiffIO by @t20100 in #3841
  • Fix rgb profile by @vallsv in #3846
  • silx.gui.plot.items.roi: Added RegionOfInterest's getText and setText methods by @t20100 in #3847
  • Added profile to compare image by @vallsv in #3845
  • silx.gui.plot: Added per-axis toggle of PlotWidget zoom by @t20100 in #3842
  • CompareImage: Feature a consistent autoscale by @vallsv in #3823
  • silx.gui.plot: Added per axes zoom to PlotWidget by @t20100 in #3843
  • Update the curve color cycle by @vallsv in #3853
  • Use linewidth2 as default selected style by @vallsv in #3854
  • CompareImages: Fix the A-B visualization mode by @vallsv in #3856
  • Get data without schema by @vallsv in #3859
  • Use "C" prefix to identify a color from the default palette by @vallsv in #3861
  • silx.gui.plot.PlotWidget: do not reset zoom when changing axes scales by @t20100 in #3862
  • silx view: Added keyboard shortcuts for open/close all by @t20100 in #3863
  • compareimage: tune diff profile colors by @vallsv in #3864
  • [OpenCL] atomic operation by @kif in #3855
  • silx.gui.plot.PlotWidget: do not reset zoom when changing axes scales - follow-up by @t20100 in #3869
  • silx.io: Fixed small/big endian support in test by @t20100 in #3873
  • ArcROI: Hide the handler instead of hidding the symbol by @vallsv in #3887
  • There is no such file by @kif in #3899
  • PlotWidget: Added sigBackendChanged by @vallsv in #3890
  • silx.gui.plot: Fixed PlotWidget mouse cursor update by @t20100 in #3904
  • Fix colormap dialog data bound by @vallsv in #3858
  • Silx compare doc by @vallsv in #3884
  • silx.gui.plot.PlotWidget: Fixed display of Shape with dashes and a background color by @t20100 in #3906
  • silx.gui: Check Qt/pyopengl platform compatibility; silx view/compare: Use matplotlib if OpenGL is not available by @t20100 in #3905
  • silx.gui.plot.PlotWidget: Added support for 'other' kind of plot items by @t20100 in #3908
  • add split pseudo-voigt with split lorentzian fraction by @woutdenolf in #3902
  • Build: Removed constraint on setuptools version by @t20100 in #3909
  • Dependency: Replaced setuptools's pkg_resources with packaging as runtime dependency by @t20100 in #3910
  • silx view: Added --slices option by @t20100 in #3860
  • silx.gui: For PySide6 required version is >=6.4 by @t20100 in #3872
  • Arc roi getPositionRole by @vallsv in #3894
  • Added populateContextMenu to ROIs by @vallsv in #3891
  • silx.opencl.common: Reworked initialisation of the module by @t20100 in #3903
  • Fix: Datasets with many rows fail to load due to incorrect variable type by @carez in #3926
  • Do not probe GPU interfaced with PoCL by @kif in #3924
  • 3932 pyopencl ctx by @kif in #3933
  • [dicttoh5] better error message for non-serializable data by @woutdenolf in #3937
  • Fix order of floating point operations by @kif in #3935
  • Issue #3942 - silx compare typo by @lesaintjerome in #3943
  • Add typings for PlotAction by @loichuder in #3941
  • io.utils.open: do not lock the file by @woutdenolf in #3939
  • tools: Clean-up Python2 support code by @t20100 in #3952
  • silx view: Fixed setting focus at startup when opening a dataset by @t20100 in #3953
  • silx.gui.plot.tools.roi: Fixed RegionOfInterestTableWidget glitch by @t20100 in #3954
  • silx view: Stopped displaying a message box for each error by @t20100 in #3955
  • silx.gui.plot.items: Added Marker item font configuration; silx.config: Added DEFAULT_PLOT_MARKER_TEXT_FONT_SIZE config by @t20100 in #3956
  • silx.gui.plot: Added Python typing by @t20100 in #3957
  • [GUI] Histogram Action. QHoverEvent does not have attribute pos by @vasole in #3960
  • gui: add WaiterOverlay. To display processing wheel on top of another widget by @payno in #3876
  • silx.gui: Fixed PyQt6 support by not using deprecated qt.QPalette.Normal by @t20100 in #3966
  • Fix mark-up and broken link in CONTRIBUTING by @loichuder in #3970
  • Add typings for DataUrl by @loichuder in #3968
  • [CI] Test latest Python 3.12 by @vasole in #3967
  • silx.gui.plot3d.ParamTreeView: Fixed Qt6 support by @t20100 in #3971
  • compare: Few improvements by @vallsv in #3944
  • UrlList: allow removal of url from the list by @payno in #3913
  • silx.gui.plot3d.ParamTreeView and silx.gui.widgets.FloatEdit: Added typing + cleanup by @t20100 in #3972
  • silx.gui.plot.items.image: improve handling of data ndim and shape by @payno in #3976
  • ColormapDialog: upgrade _DataInPlotMode to DisplayMode by @payno in #3964
  • silx.gui.plot.PlotWidget: Use matplotlib tight layout as experimental feature by @vallsv in #3865
  • silx.gui: Fixed support of OpenGL with python3.12 and pyopengl <=3.1.7 by @t20100 in #3982
  • Lazy-loading of multiprocessing module by @vasole in #3979
  • Get rid of h5py 3.10.0 deprecation warning by @vasole in #3980
  • silx.gui.colors: Added typing by @t20100 in #3974
  • silx.gui: Added support for QT_API environment variable by @t20100 in #3981
  • Do not call multiprocessing module in frozen binaries by @vasole in #3984
  • [CI] Test OpenGL on latest software by @vasole in #3983
  • silx.gui.plot.PlotWidget: Refactored item management by @t20100 in #3986
  • silx.gui.plot.tools.PositionInfo: Fixed support of dark theme by @t20100 in #3965
  • silx.gui.plot: Use PlotWidget.get|setActiveScatter instead of PlotWidget._get|setActiveItem(kind="scatter"..) by @t20100 in #3987
  • silx.gui.utils.image: Added support of QImage.Format_Grayscale8 to convertQImageToArray by @t20100 in #3958
  • silx.gui: Fixed QMouseEvent.globalPos() not available with PyQt6 by @t20100 in #3989
  • PlotWindow: add an option to get tape measure by @payno in #3959
  • silx.gui.plot.tools.roi.RegionOfInterestManager: Changed interaction mode for ROI creation by @t20100 in #3978
  • silx.gui.plot.items: Make highlighted RegionOfInterest take priority for interactions by @t20100 in #3975
  • silx.gui.plot.PlotWidget: Added support of dashed line gap color by @t20100 in #3973
  • Using black to format the code by @t20100 in #3991
  • Add test for H5Node soft link to an external link bug by @woutdenolf in #3220
  • silx.gui.plot.PlotWidget: Refactored management of active items by @t20100 in #3988
  • silx.gui.plot.PlotWidget: Changed add* methods return value to return the item instead of its legend by @t20100 in #3996
  • Doc: move to pydata sphinx theme by @payno in #3994
  • silx.gui.plot.PlotWidged: Fixed tick display of timeseries by @t20100 in #4000
  • silx.gui.qt: Fixed PyQt6 support by @t20100 in #3999
  • silx.gui.plot.items.Shape: Changed Shape.get|setLineBgColor to get|setLineGapColor by @t20100 in #4001
  • silx.gui.plot.PlotWidget: Fixed line rendering with OpenGL by @t20100 in #4002
  • [GUI] PyQt6 compatibility by @vasole in #4003
  • FloatEdit: Added widgetResizable by @vallsv in #4006
  • Added StackedProgressBar by @vallsv in #4008
  • silx.gui: improved qWidgetFactory test fixture by @t20100 in #4009
  • Bump to 2.0.dev by @vallsv in #4014
  • Robustness on the colorbar by @vallsv in #4013
  • Added background color for markers by @vallsv in #4012
  • silx.gui.plot.PlotWidget: Updated plot axes tick labels behavior by @t20100 in #4007
  • silx.gui.plot.PlotWidget: Improved line dash rendering for OpenGL backend by @t20100 in #4015
  • Update build-deb.sh by @kif in #4022
  • silx.gui.plot.PlotWidget: Added support of line style defined as (offset, (dash pattern)) by @t20100 in #4020
  • Create an example to check and compare backend features by @vallsv in #4031
  • Fixed mpl marker without background by @vallsv in #4028
  • Improve ruler by @vallsv in #4005
  • Try to use the default font from mpl by @vallsv in #4025
  • remove debian10 and 11 packaging by @t20100 in #4017
  • Antialiasing on opengl markers by @vallsv in #4023
  • cython3 compatibility by @kif in #4033
  • Update documentation by @t20100 in #4037
  • silx.gui.plot.PlotWidget: Improved text background rendering for OpenGL backend by @t20100 in #4034
  • build: Updated build dependencies by @t20100 in #4035
  • Updated and fixed documentation by @t20100 in #4036
  • Documentation: Updated landing page by @t20100 in #4039
  • silx.gui.plot: Added workaround for erroneous DPI reported by Qt by @t20100 in #4038
  • Documentation: Added a link to download the Windows app by @t20100 in #4042
  • Build: Fixed support of PyInstaller v6 by @t20100 in #4041
  • silx.gui.dialog.ColormapDialog: Updated tests by @t20100 in #4044
  • Fixed deprecation warnings by @t20100 in #4045
  • Tests: Fixed test execution by @t20100 in #4043
  • silx.gui.plot3d: Revert unwanted change and fixed deprecation warning by @t20100 in #4046
  • silx.gui.plot and plot3d: Updated font management by @t20100 in #4047

New Contributors

Full Changelog: v1.1.2...v2.0.0rc0

Contributors

kif, vasole, and 8 other contributors
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