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Update to OWLAPI 4.0.2 #2

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6 changes: 4 additions & 2 deletions .gitignore
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Expand Up @@ -2,5 +2,7 @@
*.idea
.DS_Store
*.class
*.class
target/
target
.project
.classpath
.settings
2 changes: 1 addition & 1 deletion distribution/pom.xml
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Expand Up @@ -5,7 +5,7 @@
<parent>
<artifactId>skos-api</artifactId>
<groupId>skos-api</groupId>
<version>3.1</version>
<version>3.2-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>

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6 changes: 3 additions & 3 deletions pom.xml
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Expand Up @@ -24,8 +24,8 @@
<artifactId>maven-compiler-plugin</artifactId>
<version>3.1</version>
<configuration>
<source>1.6</source>
<target>1.6</target>
<source>1.7</source>
<target>1.7</target>
</configuration>
</plugin>
</plugins>
Expand All @@ -34,7 +34,7 @@
<groupId>skos-api</groupId>
<artifactId>skos-api</artifactId>
<packaging>pom</packaging>
<version>3.1</version>
<version>3.2-SNAPSHOT</version>
<modules>
<module>skos-core</module>
<module>skos-impl</module>
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Binary file modified skos-api-onejar.jar
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2 changes: 1 addition & 1 deletion skos-core/pom.xml
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Expand Up @@ -5,7 +5,7 @@
<parent>
<artifactId>skos-api</artifactId>
<groupId>skos-api</groupId>
<version>3.1</version>
<version>3.2-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>

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4 changes: 2 additions & 2 deletions skos-example/pom.xml
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Expand Up @@ -5,7 +5,7 @@
<parent>
<artifactId>skos-api</artifactId>
<groupId>skos-api</groupId>
<version>3.1</version>
<version>3.2-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>

Expand All @@ -15,7 +15,7 @@
<dependency>
<groupId>skos-api</groupId>
<artifactId>skos-impl</artifactId>
<version>3.1</version>
<version>3.2-SNAPSHOT</version>
</dependency>
</dependencies>

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46 changes: 35 additions & 11 deletions skos-example/src/main/java/example/CreateSKOSExample.java
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@@ -1,13 +1,5 @@
package example;

import org.semanticweb.owlapi.model.*;
import org.semanticweb.owlapi.vocab.DublinCoreVocabulary;
import org.semanticweb.skos.*;
import org.semanticweb.skos.properties.SKOSAltLabelProperty;
import org.semanticweb.skosapibinding.SKOSFormatExt;
import org.semanticweb.skosapibinding.SKOSManager;
import org.semanticweb.skosapibinding.SKOStoOWLConverter;

import java.net.URI;
import java.util.ArrayList;
import java.util.List;
Expand All @@ -34,6 +26,38 @@
* Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
*/

import org.semanticweb.owlapi.model.AddAxiom;
import org.semanticweb.owlapi.model.OWLDataFactory;
import org.semanticweb.owlapi.model.OWLOntologyChangeException;
import org.semanticweb.owlapi.model.OWLOntologyManager;
import org.semanticweb.owlapi.model.OWLSubAnnotationPropertyOfAxiom;
import org.semanticweb.owlapi.vocab.DublinCoreVocabulary;
import org.semanticweb.skos.AddAssertion;
import org.semanticweb.skos.SKOSAnnotation;
import org.semanticweb.skos.SKOSAnnotationAssertion;
import org.semanticweb.skos.SKOSAnnotationProperty;
import org.semanticweb.skos.SKOSChange;
import org.semanticweb.skos.SKOSChangeException;
import org.semanticweb.skos.SKOSConcept;
import org.semanticweb.skos.SKOSConceptScheme;
import org.semanticweb.skos.SKOSCreationException;
import org.semanticweb.skos.SKOSDataFactory;
import org.semanticweb.skos.SKOSDataRelationAssertion;
import org.semanticweb.skos.SKOSDataset;
import org.semanticweb.skos.SKOSEntity;
import org.semanticweb.skos.SKOSEntityAssertion;
import org.semanticweb.skos.SKOSLiteral;
import org.semanticweb.skos.SKOSObject;
import org.semanticweb.skos.SKOSObjectRelationAssertion;
import org.semanticweb.skos.SKOSResource;
import org.semanticweb.skos.SKOSStorageException;
import org.semanticweb.skos.SKOSTypedLiteral;
import org.semanticweb.skos.SKOSUntypedLiteral;
import org.semanticweb.skos.properties.SKOSAltLabelProperty;
import org.semanticweb.skosapibinding.SKOSFormatExt;
import org.semanticweb.skosapibinding.SKOSManager;
import org.semanticweb.skosapibinding.SKOStoOWLConverter;

/**
* Author: Simon Jupp<br>
* Date: Mar 4, 2008<br>
Expand Down Expand Up @@ -122,10 +146,10 @@ public static void main(String[] args) throws SKOSCreationException {
* here is an example adding a dc:creator and a rdfs:comment
*/

SKOSAnnotation anno1 = factory.getSKOSAnnotation(DublinCoreVocabulary.DATE.getURI(), "12-07-2008");
SKOSAnnotation anno2 = factory.getSKOSAnnotation(DublinCoreVocabulary.CREATOR.getURI(), "Simon Jupp", "en");
SKOSAnnotation anno1 = factory.getSKOSAnnotation(DublinCoreVocabulary.DATE.getIRI().toURI(), "12-07-2008");
SKOSAnnotation anno2 = factory.getSKOSAnnotation(DublinCoreVocabulary.CREATOR.getIRI().toURI(), "Simon Jupp", "en");
SKOSAnnotation anno3 = factory.getSKOSAnnotation(URI.create("http://my-custom-annotation.com/example"), someResource);
SKOSAnnotation anno4 = factory.getSKOSAnnotation(DublinCoreVocabulary.CREATOR.getURI(), factory.getSKOSUntypedConstant("Simon Jupp", "en"));
SKOSAnnotation anno4 = factory.getSKOSAnnotation(DublinCoreVocabulary.CREATOR.getIRI().toURI(), factory.getSKOSUntypedConstant("Simon Jupp", "en"));
// todo need to work on typed on objects
//factory.getSKOSAnnotationsByURI(DublinCoreVocabulary.CREATOR.getURI(), factory.getSKOSTypedConstant("String", "Simon Jupp"));

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23 changes: 12 additions & 11 deletions skos-example/src/main/java/example/Example4.java
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package example;

import org.semanticweb.owlapi.model.OWLObjectProperty;
import org.semanticweb.owlapi.model.OWLObjectPropertyExpression;
import org.semanticweb.owlapi.model.OWLOntology;
import org.semanticweb.skos.SKOSCreationException;
import org.semanticweb.skos.SKOSDataFactory;
import org.semanticweb.skos.SKOSDataset;
import org.semanticweb.skos.SKOSObjectProperty;
import org.semanticweb.skosapibinding.SKOSManager;
import org.semanticweb.skosapibinding.SKOStoOWLConverter;

import java.net.URI;
/*
* Copyright (C) 2007, University of Manchester
Expand All @@ -34,6 +24,17 @@
* Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
*/

import org.semanticweb.owlapi.model.OWLObjectProperty;
import org.semanticweb.owlapi.model.OWLObjectPropertyExpression;
import org.semanticweb.owlapi.model.OWLOntology;
import org.semanticweb.owlapi.search.EntitySearcher;
import org.semanticweb.skos.SKOSCreationException;
import org.semanticweb.skos.SKOSDataFactory;
import org.semanticweb.skos.SKOSDataset;
import org.semanticweb.skos.SKOSObjectProperty;
import org.semanticweb.skosapibinding.SKOSManager;
import org.semanticweb.skosapibinding.SKOStoOWLConverter;

/**
* Author: Simon Jupp<br>
* Date: Aug 26, 2009<br>
Expand All @@ -59,7 +60,7 @@ public static void main(String[] args) {
// get the SKOS dataset as an owl ontology object
OWLOntology onto = conv.getAsOWLOntology(dataset);
//query the owl ontology for superproperties
for (OWLObjectPropertyExpression prop : owlPartOf.getSuperProperties(onto)) {
for (OWLObjectPropertyExpression prop : EntitySearcher.getSuperProperties(owlPartOf, onto)) {
System.out.println(prop.asOWLObjectProperty().getIRI());
}

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26 changes: 13 additions & 13 deletions skos-example/src/main/java/example/ReadInferredSKOS.java
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package example;

import org.semanticweb.owlapi.apibinding.OWLManager;
import org.semanticweb.owlapi.model.*;
import org.semanticweb.owlapi.reasoner.BufferingMode;
import org.semanticweb.owlapi.reasoner.OWLReasoner;
import org.semanticweb.owlapi.reasoner.OWLReasonerFactory;
import org.semanticweb.skos.*;
import org.semanticweb.skosapibinding.SKOSFormatExt;
import org.semanticweb.skosapibinding.SKOSManager;
import org.semanticweb.skosapibinding.SKOSReasoner;
import org.semanticweb.skosapibinding.SKOStoOWLConverter;

import java.net.URI;
/*
* Copyright (C) 2007, University of Manchester
Expand All @@ -35,6 +24,16 @@
* Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
*/

import org.semanticweb.owlapi.model.AddImport;
import org.semanticweb.owlapi.model.IRI;
import org.semanticweb.owlapi.model.OWLImportsDeclaration;
import org.semanticweb.owlapi.model.OWLOntology;
import org.semanticweb.owlapi.model.parameters.ChangeApplied;
import org.semanticweb.skos.SKOSCreationException;
import org.semanticweb.skos.SKOSDataset;
import org.semanticweb.skosapibinding.SKOSManager;
import org.semanticweb.skosapibinding.SKOStoOWLConverter;

/**
* Author: Simon Jupp<br>
* Date: Aug 28, 2008<br>
Expand Down Expand Up @@ -95,8 +94,9 @@ public static void main(String[] args) {

OWLImportsDeclaration importsDec = manager.getOWLManger().getOWLDataFactory().getOWLImportsDeclaration(IRI.create ("http://www.w3.org/2004/02/skos/core"));

for (OWLOntologyChange change: manager.getOWLManger().applyChange(new AddImport(mySkosAsOWLOntology, importsDec))) {
System.out.println(change.toString());
AddImport addImport = new AddImport(mySkosAsOWLOntology, importsDec);
if( manager.getOWLManger().applyChange(addImport)==ChangeApplied.SUCCESSFULLY) {
System.out.println(addImport.toString());
}

// SKOSDataset skosCoreOntology = manager.loadDataset(URI.create("http://www.w3.org/2004/02/skos/core"));
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8 changes: 4 additions & 4 deletions skos-impl/pom.xml
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Expand Up @@ -5,7 +5,7 @@
<parent>
<artifactId>skos-api</artifactId>
<groupId>skos-api</groupId>
<version>3.1</version>
<version>3.2-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>

Expand All @@ -16,13 +16,13 @@
<dependency>
<groupId>skos-api</groupId>
<artifactId>skos-core</artifactId>
<version>3.1</version>
<version>3.2-SNAPSHOT</version>
</dependency>

<dependency>
<groupId>net.sourceforge.owlapi</groupId>
<artifactId>owlapi-distribution</artifactId>
<version>3.4.10</version>
<artifactId>owlapi-osgidistribution</artifactId>
<version>[4.0.2,4.1)</version>
</dependency>

</dependencies>
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43 changes: 15 additions & 28 deletions skos-impl/src/main/java/org/semanticweb/skosapibinding/SKOSFormatExt.java
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@@ -1,10 +1,11 @@
package org.semanticweb.skosapibinding;

import org.coode.owlapi.manchesterowlsyntax.ManchesterOWLSyntaxOntologyFormat;
import org.coode.owlapi.turtle.TurtleOntologyFormat;
import org.semanticweb.owlapi.io.OWLXMLOntologyFormat;
import org.semanticweb.owlapi.io.RDFXMLOntologyFormat;
import org.semanticweb.owlapi.model.OWLOntologyFormat;
import org.semanticweb.owlapi.formats.ManchesterSyntaxDocumentFormatFactory;
import org.semanticweb.owlapi.formats.OWLXMLDocumentFormatFactory;
import org.semanticweb.owlapi.formats.RDFXMLDocumentFormatFactory;
import org.semanticweb.owlapi.formats.TurtleDocumentFormatFactory;
import org.semanticweb.owlapi.model.OWLDocumentFormat;
import org.semanticweb.owlapi.model.OWLDocumentFormatFactory;
import org.semanticweb.skos.SKOSFormat;
import org.semanticweb.skos.SKOSUnkownFormatException;

Expand Down Expand Up @@ -41,37 +42,23 @@ public enum SKOSFormatExt implements SKOSFormat {

// RDFXML(new OWLXMLVocabulary());

RDFXML("RDFXML") ,
RDFXML(new RDFXMLDocumentFormatFactory()) ,

TURTRLE("TURTLE"),
TURTRLE(new TurtleDocumentFormatFactory()),

OWLXML("OWLXML"),
OWLXML(new OWLXMLDocumentFormatFactory()),

MOS("MOS");
MOS(new ManchesterSyntaxDocumentFormatFactory());

private String localName;
private OWLDocumentFormatFactory factory;


SKOSFormatExt(String localname) {
this.localName = localname;
SKOSFormatExt(OWLDocumentFormatFactory factory) {
this.factory=factory;
}


public OWLOntologyFormat getFormat() throws SKOSUnkownFormatException {

if (localName.equals("RDFXML")) {
return new RDFXMLOntologyFormat();
}
else if (localName.equals("OWLXML")) {
return new OWLXMLOntologyFormat();
}
else if (localName.equals("MOS")) {
return new ManchesterOWLSyntaxOntologyFormat();
}
else if (localName.equals("TURTLE")) {
return new TurtleOntologyFormat();
}

throw new SKOSUnkownFormatException("Unknown format: " + localName);
public OWLDocumentFormat getFormat() throws SKOSUnkownFormatException {
return factory.createFormat();
}
}
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