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single-cell-data / TileDB-SOMA Public

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[python][r] Update deprecation lifecycle#4431

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jp-dark wants to merge 12 commits intomainsingle-cell-data/TileDB-SOMA:mainfrom

dark/deprecationssingle-cell-data/TileDB-SOMA:dark/deprecationsCopy head branch name to clipboard

Conversation Commits12 (12)Checks Files changed

Open

[python][r] Update deprecation lifecycle#4431
jp-dark wants to merge 12 commits intomainfrom
dark/deprecations

Commits

Commits on Mar 13, 2026

Update deprecations for domain in python dataframe types
jp-dark
committed
Update deprecations for domain in python shape types
jp-dark
committed
Update tests to support new API
jp-dark
committed
Update python HISTORY
jp-dark
committed
Update R deprecations (first pass)
jp-dark
committed
Make tiledbsoma_ctx parameter defunct
jp-dark
committed

Commits on Mar 16, 2026

Update somacore version
jp-dark
committed
Run linters
jp-dark
committed
Update NEW/HISTORY with PR number
jp-dark
committed
Remove defunct tests
jp-dark
committed
Add domain to pytest
jp-dark
committed
Update docs and vignettes
jp-dark
committed

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