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[python] Add support for pandas version 3#4432

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jp-dark wants to merge 4 commits intomainfrom
dark/pandas3
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[python] Add support for pandas version 3#4432
jp-dark wants to merge 4 commits intomainfrom
dark/pandas3

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@jp-dark
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@jp-dark jp-dark commented Mar 16, 2026

Issue and/or context: Closes SOMA-826

Changes:

  • Remove pin for pandas<3
  • Add docker tests for updated python dependencies

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codecov bot commented Mar 16, 2026

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 85.42%. Comparing base (a60c8f1) to head (a9796bc).

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #4432      +/-   ##
==========================================
- Coverage   85.43%   85.42%   -0.01%     
==========================================
  Files         136      136              
  Lines       21437    21437              
==========================================
- Hits        18314    18312       -2     
- Misses       3123     3125       +2     
Flag Coverage Δ
python 88.36% <100.00%> (-0.03%) ⬇️

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Components Coverage Δ
python_api 88.36% <100.00%> (-0.03%) ⬇️
libtiledbsoma ∅ <ø> (∅)
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@jp-dark
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jp-dark commented Mar 17, 2026

Blocked on anndata releasing support for pandas>=3.

@jp-dark jp-dark closed this Mar 17, 2026
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