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WalkthroughAdded a new "Short Guide for HPC Cluster Administrators" to Changes
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… and focussed on developers
cmeesters
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Mar 13, 2026
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@fbartusch well, I like it. And once more: Thank you for making the first step! Yet, as I changed so much, please review and proofread carefully. I am absolutely open to change or add anything you like.
Please indicate any wish for change (e.g. by pushing it) or your agreement to merge (eventually).
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Actionable comments posted: 2
🤖 Prompt for all review comments with AI agents
Verify each finding against the current code and only fix it if needed.
Inline comments:
In `@docs/further.md`:
- Line 850: Replace the misspelled word "deploymend" with "deployment" in the
sentence containing "To obtain a template for a cluster specific profile, search
at the [Snakemake cluster profiles repository]..." so the phrase reads
"...maintainer contacts and deployment hints."; update only that word to correct
the typo.
- Around line 846-850: Replace the unhyphenated compound adjectives in the
paragraph containing "Cluster specific profiles consist of two files:" by
updating the phrases: change "Cluster specific" to "Cluster-specific",
"Snakemake specific" to "Snakemake-specific", "node local" to "node-local", and
the later "cluster specific" to "cluster-specific" so all compound adjectives
are hyphenated consistently.
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♻️ Duplicate comments (1)
docs/further.md (1)
850-850:⚠️ Potential issue | 🟡 MinorFix spelling error: "deploymend" → "deployment".
The word "deployment" is misspelled as "deploymend" in the documentation.
📝 Proposed fix
-To obtain a template for a cluster-specific profile, search at the [Snakemake cluster profiles repository](https://github.com/snakemake/snakemake-cluster-profiles). This repository not only provides configuration templates, but also maintainer contacts and deploymend hints. +To obtain a template for a cluster-specific profile, search at the [Snakemake cluster profiles repository](https://github.com/snakemake/snakemake-cluster-profiles). This repository not only provides configuration templates, but also maintainer contacts and deployment hints.🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed. In `@docs/further.md` at line 850, Replace the misspelled word "deploymend" with "deployment" in the sentence that reads "To obtain a template for a cluster-specific profile, search at the [Snakemake cluster profiles repository]... This repository not only provides configuration templates, but also maintainer contacts and deploymend hints." — update the token "deploymend" to "deployment" so the phrase becomes "deployment hints."
🧹 Nitpick comments (1)
docs/further.md (1)
852-852: Consider improving sentence structure for clarity.The phrase "add this Slurm executor plugin, and their workflows" lacks parallel structure. Consider rephrasing to clarify what action users take with their workflows.
♻️ Suggested improvements
Option 1 (clarify that workflows are also added/installed):
-Your users will install Snakemake by Conda, add this Slurm executor plugin, and their workflows. Alternatively, Snakemake is provided by [Spack](https://packages.spack.io/package.html?name=snakemake) and [Easybuild](https://docs.easybuild.io/version-specific/supported-software/s/snakemake/), which both update regularly. +Your users will install Snakemake via Conda, add this Slurm executor plugin, and configure their workflows. Alternatively, Snakemake is provided by [Spack](https://packages.spack.io/package.html?name=snakemake) and [Easybuild](https://docs.easybuild.io/version-specific/supported-software/s/snakemake/), which both update regularly.Option 2 (restructure for better flow):
-Your users will install Snakemake by Conda, add this Slurm executor plugin, and their workflows. Alternatively, Snakemake is provided by [Spack](https://packages.spack.io/package.html?name=snakemake) and [Easybuild](https://docs.easybuild.io/version-specific/supported-software/s/snakemake/), which both update regularly. +Your users will typically install Snakemake via Conda along with this Slurm executor plugin and their workflows. Alternatively, Snakemake is provided by [Spack](https://packages.spack.io/package.html?name=snakemake) and [Easybuild](https://docs.easybuild.io/version-specific/supported-software/s/snakemake/), which both update regularly.🤖 Prompt for AI Agents
Verify each finding against the current code and only fix it if needed. In `@docs/further.md` at line 852, The sentence containing "add this Slurm executor plugin, and their workflows" is unbalanced; rephrase it for parallel structure and clarity by making the actions uniform (e.g., "install Snakemake via Conda, add the Slurm executor plugin, and install their workflows" or "install Snakemake via Conda along with this Slurm executor plugin and their workflows"); locate the sentence in the paragraph that starts with "Your users will install Snakemake by Conda..." and replace it with one of these parallel constructions.
🤖 Prompt for all review comments with AI agents
Verify each finding against the current code and only fix it if needed.
Duplicate comments:
In `@docs/further.md`:
- Line 850: Replace the misspelled word "deploymend" with "deployment" in the
sentence that reads "To obtain a template for a cluster-specific profile, search
at the [Snakemake cluster profiles repository]... This repository not only
provides configuration templates, but also maintainer contacts and deploymend
hints." — update the token "deploymend" to "deployment" so the phrase becomes
"deployment hints."
---
Nitpick comments:
In `@docs/further.md`:
- Line 852: The sentence containing "add this Slurm executor plugin, and their
workflows" is unbalanced; rephrase it for parallel structure and clarity by
making the actions uniform (e.g., "install Snakemake via Conda, add the Slurm
executor plugin, and install their workflows" or "install Snakemake via Conda
along with this Slurm executor plugin and their workflows"); locate the sentence
in the paragraph that starts with "Your users will install Snakemake by
Conda..." and replace it with one of these parallel constructions.
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Configuration used: Path: .coderabbit.yaml
Review profile: CHILL
Plan: Pro
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docs/further.md
cmeesters
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Mar 26, 2026
🤖 I have created a release *beep* *boop* --- ## [2.6.0](v2.5.4...v2.6.0) (2026-03-26) ### Features * job arrays ([#174](#174)) ([a51a5bf](a51a5bf)) * Set tmpspace with help of gres="tmpspace:10G" syntax ([#444](#444)) ([c6f6658](c6f6658)) ### Bug Fixes * logo ([#439](#439)) ([c4e3ec3](c4e3ec3)) ### Documentation * add admin documentation ([#436](#436)) ([8f7491f](8f7491f)) --- This PR was generated with [Release Please](https://github.com/googleapis/release-please). See [documentation](https://github.com/googleapis/release-please#release-please). <!-- This is an auto-generated comment: release notes by coderabbit.ai --> ## Summary by CodeRabbit * **New Features** * Added support for job arrays * Added tmpspace configuration capability via `gres="tmpspace:10G"` * **Bug Fixes** * Fixed logo display issue * **Documentation** * Added admin documentation <!-- end of auto-generated comment: release notes by coderabbit.ai -->
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Fixes #422
I tried to keep it short and concise. Please let me know if anything important is missing and I can add it.
I think the documentation in the Snakemake Cluster Profiles repo will improve in the future and will also contain valuable information for HPC admins.
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