v1.3.0

1.3.0 (2025-11-05)

Features

• added alternative tutorial intro image (0df0481)
• added condarc-file for bonn (bfe252a)
• added copy script for Bonn (c277f39)
• added copy step for the snakemake configuration file (a8f9df1)
• added last lego free image - deleted others (f332e5b)
• added latency parameter (d84ff23)
• added latency parameter (773653f)
• added latency parameter (7fd2919)
• added latency parameter (788f30b)
• added latency parameter - configurable (6711368)
• added profile for Marvin (d8fa683)
• added question about power outlets (cbb79ee)
• added selection scheme (4720ef0)
• added snakemake configuration file (a6979e6)
• clarified duration parts (5a909e8)
• condarc slide bonn (f41630c)
• configuration file for Bonn - NOT yet transcribed for all links and paths (3362501)
• example Mastodon announcement (54846e7)
• extended ordinary config yaml (9488e2d)
• final two images replaced (292f0c9)
• new config - set up remote file systems (938e102)
• new files (9a9cce0)
• new slide about --notemp flag (800b5b6)
• new slide about contribs (866ffd3)
• remark on necessary github account was added (6373626)
• updated GPU content for current executor support (bb2b7a0)
• updated number for workflow catalogue (71d2cae)

Bug Fixes

• action version for announcement bot (665bdab)
• added image to replace Lego appearance (501e8b7)
• configurable config (264755f)
• copying correct file (b928cdb)
• deleted intro slide for editor start (24de1e4)
• executor link (43729c1)
• formatting (1ff9f7c)
• gnarf - forgotten config (d949c02)
• grammer 'asking' -> 'to ask' (4420c11)
• hopefully uploading artifacts upon release (b1d5527)
• identation (cf47a27)
• mainz2025 (e721fc2)
• mentioning Marvin instead of MogonII (f229347)
• picking up config file (849c8ac)
• positioning of attribution string (2704f16)
• profile -> profiles (2a4a562)
• removed duplicate question about OSsses (b692c34)
• removed errornous screenshot file (b7fc192)
• removed the config file in this version of the solution (5828a2f)
• Snakemake -> Snakefile in localrules slide (ab3df2d)
• switched announcement workflows2 (03cb551)
• teaching elswhere questions (69c5be8)
• typo (00fc74f)
• typo (8334ca6)
• typo (fcfb190)
• typo - '0GPU' -> 'GPU' (f438c6a)
• typo - documentation (1e7f7e7)
• typo - double ci in Biinformaticians (1883d64)
• typo - Specialities (4969f7f)
• typo in image path (31a6ccb)
• typo questionaire -> questionnaire (224bef1)
• upload trigger for PDF artifacts (fb0370c)
• various adaptions for Bonn (44bd52b)
• various fixes for and after the Bonn course. (a1120de)

v1.2.0

1.2.0 (2025-05-25)

Features

• added announcement bot workflow (034082c)
• added announcement bot workflow (1e95fd1)
• added current paper reference (e83919e)
• added handout watermark to all slide sets (aece2e0)
• added image to illustrate modularization (8a00753)
• added mastodon shield for release bot (010a6cc)
• added section about modularization (7fb6840)
• added selecting workflows section (6e0cfad)
• added up-to-date image (583df46)
• added using wrappers section (35c7f7e)
• added wrapper solution (e5527d4)
• better directory layout shown - added slide about logging functionality with Python (9c46d72)
• render script can skip packaging when rendering handouts! (ceb081b)
• rendering release slides with handout watermark (a4c63a5)
• update dresden yaml (ef2b076)

Bug Fixes

• accounting for updates in barnard and mamba/conda (295f959)
• added deploy_url (f1417a2)
• added missing --sample-directory flag (5e2e45d)
• added missing quotation marks (13b31fa)
• added missing quotation marks! (0c3d5b4)
• better handout watermark (8efad6d)
• correct directory and suffix for quals plot - on some clusters display of svg files does not work. (6281807)
• corrected title (f8c6449)
• deleted outcommented code (83c7b15)
• dresden (f754fc8)
• handout production (79504f0)
• image path (badf818)
• introduced skipping producing a zip file (88fd1ac)
• minor (7374ef8)
• moved reference to bottom in Survey slide (80e8742)
• SAMPLES -> samples (613b926)
• SAMPLES -> samples (ba73e79)
• SAMPLES -> samples (7b855df)
• superscript without math mode (01c031d)
• tutorial folder renamed to task folder (46ddabc)
• typo (0bd1454)
• update github config yaml (9350d94)
• updated condarc for mogon (4a99729)
• updated plot output path (cdbd2f6)
• will end if --handout, but not --sample-diretory is given (6ff800d)
• with the introduction of libmamba in conda, we can savely use conda, too (111ffbb)

v1.1.2

1.1.2 (2025-02-18)

Bug Fixes

• accounting for several files (039d978)
• release of slides (6171920)
• syntax correction compare to PR #7 (664929f)

v1.1.1

1.1.1 (2025-02-17)

Bug Fixes

• added jinja2 (a45aa13)
• now trying with gh (5bbb9db)
• refactored (97cb664)

v1.1.0

1.1.0 (2025-02-17)

Features

• finally trying slide releases (940a224)

v1.0.0

1.0.0 (2025-02-17)

Features

• #82 update certificat generator (#83) (fddea0a)
• 09 with config read groups (b5a9ebe)
• 10 with log directives (ab0f505)
• adapted configuration template strings to the new scheme (b8f6a35)
• adapted github workflow accordingly (522856e)
• added / adjusted condarc for barnard (e83f939)
• added an enslide figure (de9cdd3)
• added cluster account and partition to config file (f853fdb)
• added collab image (12c7692)
• added combi for users and creators (59b6453)
• added config file to tutorial folder (cad3c22)
• added configuration for github (0605d6c)
• added dummy config template in yaml format (3b409ee)
• added edition strings to configurations (784d49a)
• added first version of a render script reading default from a yaml file (77281df)
• added flavour icon image (48ba3ce)
• added generic config workflow profile (50207fa)
• added image to illustrate workflow deployment (d51f313)
• added new 'report' image (a1cd8d2)
• added NumFocus-relation (#145) (073eb60)
• added slide about course material feedback (3a9e72a)
• added standard pdflatex flags (9bf7d0e)
• added task description to cloze text (bd9cc20)
• Adding slides explaining the setup, usage and creation of snakemake wrappers. (f934787), closes #44
• Adding slides explaining the setup, usage and creation of snakemake wrappers. (1462a6c), closes #44
• adding testing, mastodon badge and license badge (#87) (c505e10)
• adding the need for conventional commits to our CI (263887c)
• admin slideset (#124) (0b2d74f)
• admin talk (#177) (447cffe)
• admin talk (#180) (b2ab5dd)
• allowing for different aspect ratios (configurable) (#172) (90319f6)
• benchmarking slide set with graphical section slide and about slide (35769b5)
• central software path (#138) (e8adf3c)
• cluster name and distro configurable (55e2309)
• completing last slide (b40b80d)
• configurable basic layout (#90) (425cf14)
• copy script sample for ZIH Dresden (db52e27)
• customizable themes (#92) (e320a03)
• deploy (#144) (c86a364)
• describing purpose of input functions and asking for config file benefits (d541e34)
• description of protected funtion (3c19fe2)
• dresden cluster barnard config (05b6a95)
• eval touch (#190) (d1537a2)
• example for new minitoc section start slide (a80c0bc)
• explaining wildcards.sample (5447b5e)
• explicit mention of 06_Snakefile in end of Python slide deck (42e4e9a)
• finished graphical minitoc for Contributing section (8f62989)
• formatting (adc99ee)
• graphical minitoc for contribution section (a79b00a)
• graphical minitor for 'a first workflow' (246ffbc)
• graphical minitor for contribution section (265b9ae)
• graphical minitor for Decoration slide set (269dbe0)
• graphical slide for Python in Snakemake minitoc (ae07bec)
• hello world example for cluster barnard (69b449f)
• intro with shell comma...