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2 changes: 2 additions & 0 deletions mne/conftest.py
Original file line number Diff line number Diff line change
Expand Up @@ -197,6 +197,8 @@ def pytest_configure(config: pytest.Config):
# sklearn
ignore:Python binding for RankQuantileOptions.*:RuntimeWarning
ignore:.*The `disp` and `iprint` options of the L-BFGS-B solver.*:DeprecationWarning
# matplotlib<->nilearn
ignore:[\S\s]*You are using the 'agg' matplotlib backend[\S\s]*:UserWarning
""" # noqa: E501
for warning_line in warning_lines.split("\n"):
warning_line = warning_line.strip()
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22 changes: 19 additions & 3 deletions mne/forward/_make_forward.py
Original file line number Diff line number Diff line change
Expand Up @@ -961,7 +961,7 @@ def __init__(
self.mindist = mindist
self.n_jobs = n_jobs
src = SourceSpaces([])
self.sensors, _, _, _, self.bem = _prepare_for_forward(
self.sensors, _, _, self.update_kwargs, self.bem = _prepare_for_forward(
src,
self.mri_head_t,
info,
Expand All @@ -988,8 +988,13 @@ def __init__(
def compute(self, src):
src = _ensure_src(src).copy()
src._transform_to("head", self.mri_head_t)
kwargs = dict(limit=self.mindist, mri_head_t=self.mri_head_t, src=src)
_filter_source_spaces(self.check_inside, n_jobs=self.n_jobs, **kwargs)
_filter_source_spaces(
self.check_inside,
n_jobs=self.n_jobs,
limit=self.mindist,
mri_head_t=self.mri_head_t,
src=src,
)
rr = np.concatenate([s["rr"][s["vertno"]] for s in src])
if len(rr) < 1:
raise RuntimeError(
Expand All @@ -1012,4 +1017,15 @@ def compute(self, src):
}
fwd = _merge_fwds(fwds, verbose=False)
del fwds

fwd.update(**self.update_kwargs)
# Delete some keys to clean up the source space:
for key in ["working_dir", "command_line"]:
if key in src.info:
del src.info[key]
# our `update_kwargs` set these, but they need to be updated for this src
fwd["src"] = src
fwd["nsource"] = sum(s["nuse"] for s in src)
fwd["source_rr"] = np.vstack([s["rr"][s["inuse"] == 1] for s in src])
fwd["source_nn"] = np.tile(np.eye(3), (fwd["nsource"], 1))
return fwd
2 changes: 2 additions & 0 deletions mne/forward/tests/test_make_forward.py
Original file line number Diff line number Diff line change
Expand Up @@ -926,6 +926,8 @@ def test_make_forward_iterative():
fwd = make_forward_solution(raw.info, trans, src, bem, mindist=0, verbose=True)
# check against iterative version
fm = _ForwardModeler(raw.info, trans, bem)
fwd_iterative = fm.compute(src)
_compare_forwards(fwd, fwd_iterative, fwd["nchan"], 3 * fwd["nsource"])
midpt = fwd["nsource"] // 2
assert fwd["coord_frame"] == FIFF.FIFFV_COORD_HEAD
fwd_data = list()
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