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Merged
pull merged 1 commit into from
Oct 21, 2025
Merged

[pull] main from mne-tools:main #402

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4 changes: 1 addition & 3 deletions tools/azure_dependencies.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -9,9 +9,7 @@ if [ "${TEST_MODE}" == "pip" ]; then
elif [ "${TEST_MODE}" == "pip-pre" ]; then
${SCRIPT_DIR}/install_pre_requirements.sh
python -m pip install $STD_ARGS --pre -e .[test_extra]
echo "##vso[task.setvariable variable=MNE_TEST_ALLOW_SKIP].*(Requires (spm|brainstorm) dataset|Requires MNE-C|CUDA not|Numba not| on Windows|MNE_FORCE_SERIAL|PySide6 causes segfaults|neo).*"
# https://github.com/python-quantities/python-quantities/issues/262
python -m pip uninstall -yq neo
echo "##vso[task.setvariable variable=MNE_TEST_ALLOW_SKIP].*(Requires (spm|brainstorm) dataset|Requires MNE-C|CUDA not|Numba not| on Windows|MNE_FORCE_SERIAL|PySide6 causes segfaults).*"
else
echo "Unknown run type ${TEST_MODE}"
exit 1
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4 changes: 0 additions & 4 deletions tools/github_actions_dependencies.sh
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Expand Up @@ -37,7 +37,3 @@ echo ""
echo "::group::Installing test dependencies using pip"
python -m pip install $STD_ARGS $INSTALL_ARGS .[$INSTALL_KIND]
echo "::endgroup::"
if [[ "${MNE_CI_KIND}" == "pip-pre" ]]; then
# https://github.com/python-quantities/python-quantities/issues/262
python -m pip uninstall -yq neo
fi
2 changes: 1 addition & 1 deletion tools/github_actions_env_vars.sh
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Expand Up @@ -9,7 +9,7 @@ if [[ "$MNE_CI_KIND" == "pip"* ]]; then
# We should test an eager import somewhere, might as well be here
echo "EAGER_IMPORT=true" | tee -a $GITHUB_ENV
# Make sure nothing unexpected is skipped
echo "MNE_TEST_ALLOW_SKIP=.*(Requires (spm|brainstorm) dataset|CUDA not|Numba not|PySide6 causes segfaults|neo).*" | tee -a $GITHUB_ENV
echo "MNE_TEST_ALLOW_SKIP=.*(Requires (spm|brainstorm) dataset|CUDA not|Numba not|PySide6 causes segfaults).*" | tee -a $GITHUB_ENV
else
echo "MNE_QT_BACKEND=PySide6" | tee -a $GITHUB_ENV
fi
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2 changes: 2 additions & 0 deletions tools/install_pre_requirements.sh
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Expand Up @@ -54,6 +54,7 @@ python -m pip install $STD_ARGS \
"git+https://github.com/pyvista/pyvistaqt" \
"git+https://github.com/nilearn/nilearn" \
"git+https://github.com/pierreablin/picard" \
"git+https://github.com/the-siesta-group/edfio" \
https://gitlab.com/obob/pymatreader/-/archive/master/pymatreader-master.zip \
git+https://github.com/mne-tools/mne-qt-browser \
git+https://github.com/pyqtgraph/pyqtgraph \
Expand All @@ -63,6 +64,7 @@ python -m pip install $STD_ARGS \
git+https://github.com/h5io/h5io \
git+https://github.com/BUNPC/pysnirf2 \
git+https://github.com/the-siesta-group/edfio \
git+https://github.com/python-quantities/python-quantities \
trame trame-vtk trame-vuetify jupyter ipyevents ipympl openmeeg \
imageio-ffmpeg xlrd mffpy traitlets pybv eeglabio defusedxml \
antio
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