R Package Calculating ECOFF Values based on Bayesian Approach
The package ECOFFBayes performs a density estimation for a mixture of binomial and normal densities.
Using this mixture density an epidemiological cut-off value (short ECOFF) is determined which separates the wild type population within the antibiotics.
Install the package using devtools.
# install.packages("devtools")
devtools::install_github("sp2019-antibiotics/ECOFFBayes")