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GTDB r226 database validates successfully but fails to classify any sequences

Status: Open.

#179 In steineggerlab/Metabuli;

· shiraz-shah opened on Mar 19, 2026

metabuli classifiedRefiner issues

Status: Open.

#177 In steineggerlab/Metabuli;

· MicroBTM opened on Mar 6, 2026

Linker error: undefined reference to fastq_validate_entry when building Metabuli

Status: Open.

#176 In steineggerlab/Metabuli;

· hackerzone85 opened on Mar 3, 2026

Prebuilt databases do not have nodes.dmp for the use of classifiedRefiner module; segfault if using gtdb_r226 instead of gtdb_r220+virus+human database

Status: Open.

#175 In steineggerlab/Metabuli;

· TomKLHui opened on Feb 24, 2026

classifiedRefiner fails to produce krona_refined.html

Status: Open.

#172 In steineggerlab/Metabuli;

· danstrange opened on Jan 20, 2026

Understanding Metabuli scores on real metagenomic datasets

Status: Open.

#171 In steineggerlab/Metabuli;

· taorong007 opened on Jan 19, 2026

Can Metabuli be used for the discovery of new viruses?

Status: Open.

#167 In steineggerlab/Metabuli;

· zhangwenda0518 opened on Dec 5, 2025

Integration of pyrodigal-gv for viral gene prediction in Metabuli

Status: Open.

#160 In steineggerlab/Metabuli;

· Enkabloza opened on Oct 15, 2025

How to deal with binning artifacts in the database?

Status: Open.

#159 In steineggerlab/Metabuli;

· alephreish opened on Oct 12, 2025

extract question: How to extract the unclassified reads

Status: Open.

#158 In steineggerlab/Metabuli;

· grendon opened on Oct 1, 2025

Slow building of GTDB database

Status: Open.

#152 In steineggerlab/Metabuli;

· larssnip opened on Jul 20, 2025

Segmentation fault on classify with refseq_virus, [Edit: unless --max-ram is used]

Status: Open.

#151 In steineggerlab/Metabuli;

· samuell opened on Jul 18, 2025