WIP: tidy imports and dependencies#738

Open

Adamtaranto wants to merge 47 commits intomainfrom

Commits on Jan 5, 2025

Commits on May 11, 2025

Commits on Feb 15, 2026

ribbon_annot_boxes (#777)

Adamtaranto
and
Adam Taranto
committed
ribbon_patch (#778)

Adamtaranto
and
Adam Taranto
committed
remove indent-rainbow recommendation

tanghaibao
authored and
Adamtaranto
committed
git url typo
Adamtaranto
committed
do not impose minimum chromosome count in karyotype (thanks @bitahu, #783) (#784)

tanghaibao
authored and
Adamtaranto
committed
update gff.gtf() (#789)

tanghaibao
authored and
Adamtaranto
committed
Dev (#794)

tanghaibao
authored and
Adamtaranto
committed
Add mode=3 (#795)

tanghaibao
authored and
Adamtaranto
committed
update FileMerger (#797)

tanghaibao
authored and
Adamtaranto
committed
Action_maintainance (#801)
Adamtaranto
committed
chore: Update CITATION.cff to version 1.5.8 (#802)

github-actions[bot]
authored and
Adamtaranto
committed
Fix ValueError in fetch ensembl/phytozome when displaying help (#805)

authored and
Adamtaranto
committed
chore: Update CITATION.cff to version 1.5.9 (#806)

github-actions[bot]
authored and
Adamtaranto
committed
Fix: Skip blank/whitespace lines in karyotype layout parser (#807)

mswiseman
authored and
Adamtaranto
committed
Optimize liftover BLAST processing to reduce memory usage by 10-20x (#809)

Copilot
authored and
Adamtaranto
committed
chore: Update CITATION.cff to version 1.5.10 (#810)

github-actions[bot]
authored and
Adamtaranto
committed
remove numpy<2 (#812)

tanghaibao
authored and
Adamtaranto
committed
chore: Update CITATION.cff to version 1.5.11 (#813)

github-actions[bot]
authored and
Adamtaranto
committed
Update_actions (#814)
Adamtaranto
committed
replace brewer2mpl with palettable (#818)
Adamtaranto
committed
chore: Update CITATION.cff to version 1.6.1 (#819)

github-actions[bot]
authored and
Adamtaranto
committed