Can't plot when define terminal_states()

[alexandre-jf-fernandes]

Hi there,

I'm trying to get a heatmap of genes of each macrostate, but when run g_fwd.compute_terminal_states() g_fwd.compute_absorption_probabilities() the not terminal lineages can't longer be used for plotting the heatmap or calculating lineage_drivers. Can you help me?

cr.pl.heatmap(adata, model, genes=epi_list_filtered, backend='loky', show_all_genes=True, show_absorption_probabilities=True, time_key='velocity_pseudotime', cluster_genes=True, cmap='viridis', )

Output: Just terminal state lineage

[Marius1311]

Please open an issue for this. For discussion topics (more general questions, not a bug or feature request), see https://discourse.scverse.org/c/ecosystem/cellrank/40