A Framework for IMS-MS Raw Data Processing written in Rust and Python.
A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
An open-source prediction framework for peptide ion collision cross section (CCS) values with python.
Software to convert multidimensional MS data from files in proprietary vendor formats to HDF5 format in the simple MZA data structure.
prototype machine-learning solutions for high-throughput MS with ease
A user-friendly application for precise conformation sampling
Beta-DIA is a partially open-source, free-to-use Python software that provides comprehensive peptide/protein identification and accurate quantification results for single-shot diaPASEF data.
Gas phase molecular charge state predictor
A software tool for omics-agnostic automated quality control of mass spectrometry data.
Python and R scripts with examples demonstrating the conversion of IM-MS raw data to CCS/z space.
Python script with a basic UI to automatically read and fit gaussian peaks to mzXML files. Tested only for files from Waters cyclic-MS. Can also read and show MS spectra.
Origami analyst is a Framework tool, which provides predictive structural data on a protein based off Mass Spectrometry and Ion mobility data provided by the user. It is still a work in progress and my first project to upload to github.
A simple GUI tool for comparing two CIU datasets
An application for peptide sequencing of ion mobility mass spectrometry data
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