A React component to sketch / search for network motifs.

Finding Network Motifs Using MCMC Sampling

Example implementation of "Mueen's Algorithm for Similarity Search" (aka MASS) for ESP32

Automatic Motif Detection wrapper for dotmotif

Gibby is a Python package designed to find the motif of a transcription factor de novo based on ChIP-seq data.

Scans TF binding sites based on motifs.

Motif Finding using Gibbs Sampler

Motif Finding through Gibbs Sampling

R script for finding and scoring motifs in small genomes using position-frequency tables

Coding problems from course 1 of the Bioinformatics specialization

Bioinformatics- High-throughput data Analysis project

Workshops, Course Schedule and Teaching Assistant Review from my time as a chosen Undergraduate Teaching Assistant for the University of Pittsburgh course, BIOSC1540 - Computational Genomics taught by Dr. Miler Lee.

Finding motifs in proteins by uniprot accession number

A robust Python-based bioinformatics tool for comprehensive DNA sequence analysis and manipulation.

Intro to Bioinformatics course contents

DNA sequence analysis toolkit with GUI and CLI.

Perl script to find sequences on multi fasta files that match a determined protein motif. The motifs are coded as a regular expression RegEx. Originally designed to search for fungal chitin synthase proteins.

Discovering Leitmotifs in Multidimensional Time Series