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@sbairos sbairos commented Oct 14, 2025

In the footsteps of #2532, here's a hyperbolic-parabolic elixir that is sped up using SparseConnectivityTracer

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sbairos commented Oct 14, 2025

cc @DanielDoehring

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Review checklist

This checklist is meant to assist creators of PRs (to let them know what reviewers will typically look for) and reviewers (to guide them in a structured review process). Items do not need to be checked explicitly for a PR to be eligible for merging.

Purpose and scope

  • The PR has a single goal that is clear from the PR title and/or description.
  • All code changes represent a single set of modifications that logically belong together.
  • No more than 500 lines of code are changed or there is no obvious way to split the PR into multiple PRs.

Code quality

  • The code can be understood easily.
  • Newly introduced names for variables etc. are self-descriptive and consistent with existing naming conventions.
  • There are no redundancies that can be removed by simple modularization/refactoring.
  • There are no leftover debug statements or commented code sections.
  • The code adheres to our conventions and style guide, and to the Julia guidelines.

Documentation

  • New functions and types are documented with a docstring or top-level comment.
  • Relevant publications are referenced in docstrings (see example for formatting).
  • Inline comments are used to document longer or unusual code sections.
  • Comments describe intent ("why?") and not just functionality ("what?").
  • If the PR introduces a significant change or new feature, it is documented in NEWS.md with its PR number.

Testing

  • The PR passes all tests.
  • New or modified lines of code are covered by tests.
  • New or modified tests run in less then 10 seconds.

Performance

  • There are no type instabilities or memory allocations in performance-critical parts.
  • If the PR intent is to improve performance, before/after time measurements are posted in the PR.

Verification

  • The correctness of the code was verified using appropriate tests.
  • If new equations/methods are added, a convergence test has been run and the results
    are posted in the PR.

Created with ❤️ by the Trixi.jl community.

@DanielDoehring DanielDoehring added the enhancement New feature or request label Oct 14, 2025
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codecov bot commented Oct 14, 2025

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 96.81%. Comparing base (1d75f8f) to head (75af937).

Additional details and impacted files
@@           Coverage Diff           @@
##             main    #2604   +/-   ##
=======================================
  Coverage   96.81%   96.81%           
=======================================
  Files         535      536    +1     
  Lines       42813    42832   +19     
=======================================
+ Hits        41446    41465   +19     
  Misses       1367     1367           
Flag Coverage Δ
unittests 96.81% <100.00%> (+<0.01%) ⬆️

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ranocha commented Oct 14, 2025

@DanielDoehring Could you please review this initially and ping me for a final review?

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And we also need a test where we restart

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sbairos commented Oct 22, 2025

Not sure what's going on with the formatting check. The only failure is:

examples/tree_1d_dgsem/elixir_advection_diffusion_implicit_sparse_jacobian_restart.jl:27:-            dt = dt_restart, save_everystep = false, callback = callbacks);
examples/tree_1d_dgsem/elixir_advection_diffusion_implicit_sparse_jacobian_restart.jl:27:+            dt = dt_restart, save_everystep = false, callback = callbacks);

which as far as I can tell is identical. When I replace this line in my IDE, git doesn't detect any difference

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You don't need to worry about the suggestion made in CI job. You can follow the instructions in the link above and the formatting will be applied automatically.

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sbairos commented Oct 22, 2025

Ah thanks @JoshuaLampert! I had been thinking there must be a better way to apply the formatting changes but didn't think to ask

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