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Input and export scipy.cluster.hierarchy lineage matrix format

Status: Open.

#64 In tskit-dev/tsconvert;

· hyanwong opened on May 16, 2025

No nexus reading/writing

Status: Open.

#57 In tskit-dev/tsconvert;

· hyanwong opened on Sep 2, 2024

Export to BGEN

Status: Open.

#56 In tskit-dev/tsconvert;

· hyanwong opened on Aug 25, 2024

Oxford phased haplotype file (.haps) + .sample export

Status: Open.

#55 In tskit-dev/tsconvert;

· hyanwong opened on Nov 28, 2023

Require semicolon for newick?

Status: Open.

#50 In tskit-dev/tsconvert;

· hyanwong opened on Jan 24, 2023

ARG conversion functionality

Status: Open.

#44 In tskit-dev/tsconvert;

· hyanwong opened on Nov 13, 2022

Provenance recording

enhancementNew feature or requestNew feature or request

Status: Open.

#37 In tskit-dev/tsconvert;

· benjeffery opened on Apr 7, 2022

·  

Initial 0.1 release

Importing large newick files

Status: Open.

#36 In tskit-dev/tsconvert;

· hyanwong opened on Mar 25, 2022

From sequence of newick trees?

Status: Open.

#35 In tskit-dev/tsconvert;

· swamidass opened on Nov 2, 2021

Add pandas and newick to install dependancies

bugSomething isn't workingSomething isn't working

Status: Open.

#33 In tskit-dev/tsconvert;

· benjeffery opened on Jul 22, 2021

·  

Initial 0.1 release

from_ms: assign samples to populations

Status: Open.

#32 In tskit-dev/tsconvert;

· grahamgower opened on Jul 15, 2021

from_ms should do something useful with replicates

enhancementNew feature or requestNew feature or request

Status: Open.

#31 In tskit-dev/tsconvert;

· grahamgower opened on Jul 10, 2021

·  

Initial 0.1 release