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0.2.0

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@molpopgen molpopgen released this 21 Apr 23:49
· 466 commits to main since this release
0.2.0
daffeda

2021-04-21, Version 0.2.0

Commits

  • [daffeda43e] bump version to 0.2.0 (molpopgen)
  • [0dad5e39d2] Update docs (#93) (Kevin R. Thornton)
  • [f905b9c384] Add reverse tree iteration. (#92) (Kevin R. Thornton)
  • [a1a033f901] Add development documentation. (#91) (Kevin R. Thornton)
  • [ce3d8f4849] Refine forward sim example (#90) (Kevin R. Thornton)
  • [b1022e1f59] Refactor how tskit flags are handled. (#89) (Kevin R. Thornton)
  • [56e43cb0ff] Add forward simulation example. Closes #71. (#86) (Kevin R. Thornton)
  • [5530d7b234] Refactor all examples into examples/ (#85) (Kevin R. Thornton)
  • [651e4edcac] Collect public traits in traits.rs. Closes #81. (#84) (Kevin R. Thornton)
  • [11ad49f0e1] Remove mention of use NodeIterator. Closes #68. (#83) (Kevin R. Thornton)
  • [df28231d9a] Add test fixtures module. Closes #73 (#80) (Kevin R. Thornton)
  • [3a8a82637e] Rename Tree::nodes to Tree::traverse_nodes. (#79) (Kevin R. Thornton)
  • [4e7af98ac5] Update GitHub actions. (#78) (Kevin R. Thornton)
  • [43e14bb8a6] Add NodeListGenerator trait bound to TableAccess. Closes #67. (#75) (Kevin R. Thornton)
  • [ae203769f4] add id field to table row types. Closes #76 (#77) (Kevin R. Thornton)
  • [346c804be8] Make tree arrays public. Closes #70 (#74) (Kevin R. Thornton)
  • [a2dfcfe8f6] Add TableCollection and TreeSequence simplification (#64) (Kevin R. Thornton)
  • [c62ccd21aa] Add TableAccess trait and implement for TableCollection and TreeSequence. (#66) (Kevin R. Thornton)
  • [167209466a] Remove duplication of entire table collection when creating a tree sequence. (#65) (Kevin R. Thornton)
  • [df258ad8d1] Fix useless conversion in lib::c_api_version (#63) (Kevin R. Thornton)
  • [fcca8bb682] remove unnecessary function from util (#62) (Kevin R. Thornton)
  • [0ee9f86db4] Merge pull request #61 from molpopgen/add_individual_and_migration_tables (Kevin R. Thornton)
  • [8f072c47d1] Add migrations and individuals tables. (molpopogen)
  • [b2c891300b] Merge pull request #60 from molpopgen/tskit_C_version (Kevin R. Thornton)
  • [f48b2fed57] Add functions to return C API version info (molpopogen)
  • [87593d4bdc] Merge pull request #59 from molpopgen/add_test_metadata_some_columns_only (Kevin R. Thornton)
  • [5ab8e8c9d0] Add test of metadata decoding when not all rows have metadata. (molpopogen)
  • [adcc321cc8] Merge pull request #58 from molpopgen/table_row_access (Kevin R. Thornton)
  • [860a647bf3] * Add ::row for all tables (molpopgen)
  • [6b0a77e106] Add util.rs (molpopgen)
  • [6b9631e1f1] Merge pull request #57 from molpopgen/unify_table_iteration (Kevin R. Thornton)
  • [3d79f8bbfa] Add ability to iterate tables from a TableCollection: (molpopogen)
  • [392ce57e0a] Merge pull request #52 from molpopgen/table_iteration (Kevin R. Thornton)
  • [2fe5912c34] Add table iteration w/optional handling of metadata. (molpopgen)
  • [9a59a148f7] Merge pull request #55 from molpopgen/wrapped_tsk_array_iter_adapter (Kevin R. Thornton)
  • [84b0b496c1] Replace built-in iteration with iterator adapter for WrappedTskArray (molpopgen)
  • [18234998ea] Merge pull request #56 from molpopgen/metadata_macro_fixes (Kevin R. Thornton)
  • [49bbd0f2f4] metadata_to_vector macro is now a simple return (no ? operator). (molpopgen)
  • [6e293acf14] Remove unused paramter to metadata_to_vector. Fixes #54. (molpopgen)
  • [45347a576c] Change log for 0.1.2 (molpopgen)
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