Clean the MSA to remove non-standard bases#59
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akashbahai wants to merge 3 commits intouw-ipd:mainfrom
Open
Clean the MSA to remove non-standard bases#59akashbahai wants to merge 3 commits intouw-ipd:mainfrom
akashbahai wants to merge 3 commits intouw-ipd:mainfrom
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fdimaio
requested changes
Apr 3, 2024
run_RF2NA.sh
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| CPU="8" # number of CPUs to use | ||
| MEM="64" # max memory (in GB) | ||
| CPU="128" # number of CPUs to use | ||
| MEM="500" # max memory (in GB) |
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can you revert this change?
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Hi @fdimaio,
I have set the CPU and MEM resources to the default settings.
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I have added a script to clean the MSA by removing sequences with non-standard bases. This will prevent the assertion error see issue .