Workflow RO-Crate spec updates

Workflow-RO-Crate/1.1-DRAFT/index.md

@@ -85,7 +85,7 @@ For historical reasons, in Workflow RO-Crates conforming to RO-Crate version 1.1
 
 ### Main Workflow
 
-The _Crate_ MUST contain a data entity of type `["File", "SoftwareSourceCode", "ComputationalWorkflow"]` as the _Main Workflow_.
+The _Crate_ MUST contain a _Main Workflow_ data entity whose types MUST include `File`, `SoftwareSourceCode` and `ComputationalWorkflow`.
 
 The _Crate_ MUST refer to the _Main Workflow_ via `mainEntity`.
 
@@ -107,6 +107,10 @@ The _Crate_ COULD contain a _Main Workflow Diagram_, indicated as a data entity
 
 If  _Main Workflow Diagram_ is present, the _Main Workflow_ MUST refer to it via `image`.
 
+### Main Workflow Steps
+
+Individual steps of the _Main Workflow_ MAY be described in the crate, in addition to the description of the workflow as a whole. Each step MUST be represented as a `HowToStep`, and the workflow MUST reference any `HowToStep` instances that represent its steps via `step`. Each `HowToStep` instance MAY indicate its position in the execution order via `position`. In addition to `File`, `SoftwareSourceCode` and `ComputationalWorkflow`, a workflow that points to step metadata via `step` MUST have a type of `HowTo`.
+
 ### Crate
 
 The _Crate_ MUST specify a `license`. The license is assumed to apply to any content of the crate, unless overriden by `license` on individual `File` entities.
@@ -123,6 +127,8 @@ The `ComputationalWorkflow` description of the _Main Workflow_ SHOULD comply wit
 
 Conformance with the Bioschemas profile SHOULD be indicated with a `conformsTo` on the _Main Workflow_ entity.
 
+Workflows can have multiple input and output parameter slots that have to be mapped to actual files, directories or other values (e.g., a string or a number) before they can be executed. It is OPTIONAL to define such entities for a `ComputationalWorkflow`. If included, parameter definitions MUST be provided as `FormalParameter` entities and referenced from the `ComputationalWorkflow` via `input` and `output`.
+
 **Tip**: See [RO-Crate 1.2: Complying with Bioschemas Computational Workflow profile](https://www.researchobject.org/ro-crate/specification/1.2/workflows.html#complying-with-bioschemas-computational-workflow-profile)
 
 ## WorkflowHub-specific Features/Requirements

_config.yml

@@ -1,10 +1,10 @@
 title: WorkflowHub project
 
-description: > 
+description: >
   Project pages for developing and running WorkflowHub, 
   a registry of scientific workflows.
 
-remote_theme: ELIXIR-Belgium/elixir-toolkit-theme
+remote_theme: ELIXIR-Belgium/elixir-toolkit-theme@5.0.0
 
 permalink: pretty
 
@@ -39,10 +39,10 @@ defaults:
     values:
       search_exclude: true
 
-theme_variables: 
+theme_variables:
   theme_color: 1f8787
 
 plugins:
   - jemoji
   - jekyll-redirect-from
-  - jekyll-sitemap 
+  - jekyll-sitemap