SPARTA AAAI 2026 Oral | STProtein

📣 News

• [2025/02/05]:🤗 STProtein: predicting spatial protein expression from multi-omics data published SPARTA AAAI 2026 Top Conference can be seen in arXiv: https://arxiv.org/abs/2602.05811v1
• [2025/01/26]:🤗 I will give the Oral presentation about STProtein on SPARTA AAAI 2026 Top Conference
• [2024/11/18]:🤗 STProtein: predicting spatial protein expression from multi-omics data is accepted by Spatial Reasoning and Therapeutics with AI : From Omics to Imaging (SPARTA) AAAI 2026 Oral.

🌉 Workflow of STProetin

💻 SYSTEM REQUIREMENTS

STProtein is tested on single Nvidia RTX 4090.

⏬ INSTALLATION

scanpy
torch
torch-geometric
numpy
pandas
scikit-learn
seaborn
matplotlib
tqdm

🔒 License

• See LICENSE for details.

✏️ Citation

If you use this software in your research, please cite our paper:

@inproceedings{jiangstprotein,
  title={STProtein: predicting spatial protein expression from multi-omics data},
  author={Jiang, Zhaorui and Yuan, Yingfang and Hu, Lei and Pang, Wei},
  booktitle={1st AAAI Workshop on SPARTA $\{$$\backslash$textemdash$\}$ Spatial Reasoning and Therapeutics with AI: From Omics to Imaging}
}

@article{jiang2026stprotein,
  title={STProtein: predicting spatial protein expression from multi-omics data},
  author={Jiang, Zhaorui and Yuan, Yingfang and Hu, Lei and Pang, Wei},
  journal={arXiv preprint arXiv:2602.05811},
  year={2026}
}