Popular repositories Loading

1. CaImAn CaImAn Public

   Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

   Python 722 397

2. finufft finufft Public

   Non-uniform fast Fourier transform library of types 1,2,3 in dimensions 1,2,3 on the CPU or GPU

   C++ 411 101

3. DeepFRI DeepFRI Public

   Deep functional residue identification

   Python 349 89

4. CaImAn-MATLAB CaImAn-MATLAB Public

   Complete Matlab pipeline for large scale calcium imaging data analysis

   MATLAB 261 152

5. NoRMCorre NoRMCorre Public

   Matlab routines for online non-rigid motion correction of calcium imaging data

   MATLAB 157 97

6. FMM3D FMM3D Public

   Flatiron Institute Fast Multipole Libraries --- This codebase is a set of libraries to compute N-body interactions governed by the Laplace and Helmholtz equations, to a specified precision, in thre…

   Fortran 148 52