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Probably Learning!
😎
Probably Learning!
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Achievement: Pull Shark

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Achievement: Pull Shark

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@chiralbd @deepbioacademy

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hossainlab/README.md

Multiomics Scientist

Cancer Genomics • Single-Cell Transcriptomics • Spatial Transcriptomics • Multi-omics Integration
🌐 Website • Google Scholar • ORCID • LinkedIn • YouTube

About Me

I am a Multiomics Scientist with research interests in cancer genomics, single-cell transcriptomics, spatial transcriptomics, and multi-omics data integration.

My work focuses on analysing large-scale public genomic datasets to understand tumour biology, cellular heterogeneity, immune–tumour interactions, and disease mechanisms. I develop reproducible computational workflows that transform complex biological data into biologically meaningful discoveries.

I am particularly interested in integrating bulk RNA-seq, single-cell RNA-seq, and spatial transcriptomics to identify robust biomarkers and therapeutic targets for precision oncology. My long-term research goal is to contribute to computational approaches that improve our understanding of cancer biology through open science and reproducible bioinformatics.

Research Interests

  • 🧬 Cancer Genomics
  • 🔬 Single-Cell Transcriptomics
  • 🧫 Spatial Transcriptomics
  • 🧩 Multi-omics Integration
  • 🤖 AI in Biology
  • 📊 Reproducible Bioinformatics
  • ☁️ High Performance Computing

"Advancing biomedical discovery through reproducible bioinformatics and open science."

Pinned Loading

  1. salmon-rnaseq salmon-rnaseq Public

    End-to-end bulk RNA-seq quantification pipeline using Salmon and SRA-Tools

    R 2

  2. fezf2-multiomics fezf2-multiomics Public

    Mechanisms of Fezf2 mutation in cortical development and identification of therapeutic targets

    Jupyter Notebook 1

  3. GBM-Transcriptomic-MetaAnalysis GBM-Transcriptomic-MetaAnalysis Public

    GBM Transcriptomic Meta-Analysis

    HTML 1

  4. sc-workflow sc-workflow Public

    Single-Cell Analysis Workflow

    Python 1

  5. tme-cell-state-annotation-benchmark tme-cell-state-annotation-benchmark Public

    Can General Annotation Tools Correctly Identify Functional States of Non-Malignant Cells in the Tumour Microenvironment?

    Python

  6. amr_drug_repurposing amr_drug_repurposing Public

    Deep learning-driven AMR drug repurposing using ChEMBL resistance phenotypes

    Jupyter Notebook