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    40 repositories

    • one-health

      Public
      An interactive knowledge base for bioactive compound discovery
      TypeScript
      •
      Apache License 2.0
      •1•4•3•1•Updated Aug 21, 2026Aug 21, 2026

    • trays_creator

      Public
      Java
      •0•0•0•0•Updated Aug 20, 2026Aug 20, 2026

    • MTLMPO_WyrzykalaProject

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 13, 2026Aug 13, 2026

    • Exploitable

      Public
      A demo project for highlighting some security issues
      Java
      •
      MIT License
      •0•0•0•2•Updated Jul 23, 2026Jul 23, 2026

    • MetFamily

      Public
      Understanding metabolism is fundamental in biomedical and plant research and the identification and quantification of thousands of metabolites by mass spectrome…
      annotationanalysismass-spectrometry
      annotationanalysismass-spectrometrymetabolitescomprehensive-metabolomics-studies
      R
      •
      GNU General Public License v2.0
      •8•12•16•1•Updated Jul 13, 2026Jul 13, 2026

    • signals

      Public
      IPB Signals Notebook toolkit
      Java
      •
      Apache License 2.0
      •0•2•0•1•Updated Jul 12, 2026Jul 12, 2026

    • MolPaintJS

      Public
      Pure HTML5 / JavaScript molecular editor / viewer
      JavaScript
      •
      Apache License 2.0
      •3•8•0•6•Updated May 28, 2026May 28, 2026

    • CRIMSy

      Public
      Cloud Resource and Information Management System
      Java
      •
      Apache License 2.0
      •4•2•48•4•Updated May 20, 2026May 20, 2026

    • SelectZyme-app

      Public
      Repository for the SelectZyme web app to visualize prebuild analyses to accompany the publication.
      Python
      •
      MIT License
      •1•0•0•1•Updated May 19, 2026May 19, 2026

    • fasta-search-service

      Public
      Reusable Docker container for sequence library search and alignment in relational databases with the FASTA program package
      dockerrestfasta
      dockerrestfastabiological-sequences
      Java
      •
      Apache License 2.0
      •1•0•0•1•Updated May 6, 2026May 6, 2026

    • GoldenMutagenesisWeb

      Public
      This repository is used for the development of the GoldenMutagenesis web application
      R
      •
      GNU Affero General Public License v3.0
      •1•0•9•0•Updated Apr 15, 2026Apr 15, 2026

    • SelectZyme

      Public
      SelectZyme: Select enzymes interactively and navigate sequence space.
      Jupyter Notebook
      •
      MIT License
      •1•0•0•2•Updated Apr 8, 2026Apr 8, 2026

    • MetFrag

      Public
      Repo hosting the MetFrag website
      HTML
      •6•11•13•1•Updated Apr 6, 2026Apr 6, 2026

    • MetFragRelaunched

      Public
      Relaunch of the initial MetFrag project.
      Java
      •15•19•50•11•Updated Mar 9, 2026Mar 9, 2026

    • MetFragTraining

      Public
      Training material for MetFrag usage
      JavaScript
      •4•3•0•0•Updated Feb 9, 2026Feb 9, 2026

    • ipb-charts-public

      Public
      Packaging of applications for Kubernetes as Helm charts or Rancher Apps
      kuberneteshelm
      kuberneteshelm
      Go Template
      •
      Apache License 2.0
      •1•0•1•1•Updated Jan 31, 2026Jan 31, 2026

    • MetFamilIE

      Public
      The MetFamily Galaxy Interactive Environment Tool for MetFamily
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Sep 28, 2025Sep 28, 2025

    • IPBSticker

      Public
      Hex Sticker for IPB, tools and Databases
      R
      •1•0•0•0•Updated Jul 29, 2025Jul 29, 2025

    • one-health-sources

      Public
      Code repository for data collection, processing and integration for the One Health Platform project
      0•0•0•0•Updated Jun 5, 2024Jun 5, 2024

    • FlavorMiner

      Public
      Jupyter Notebook
      •2•12•0•0•Updated Jun 3, 2024Jun 3, 2024

    • MolecularFaces

      Public
      Java Server Faces UI components for chemistry and biochemistry
      chemistrygeneticsbiology
      chemistrygeneticsbiologybiochemistryjsfjavaserverfaceschemical-structure
      Java
      •
      Apache License 2.0
      •2•2•0•0•Updated May 16, 2024May 16, 2024

    • ISATab-DataSets

      Public
      ISA-Tab descriptions of DataSets created and managed at the IPB
      JavaScript
      •
      Creative Commons Zero v1.0 Universal
      •1•0•0•0•Updated Apr 22, 2024Apr 22, 2024

    • libstemmer

      Public
      mavenize snowball stemmer
      Java
      •0•0•0•0•Updated Apr 12, 2024Apr 12, 2024

    • iESTIMATE

      Public
      Identifying ESsenTIal Molecular vAriables in Terrestrial Ecology
      HTML
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 21, 2024Mar 21, 2024

    • MetFamily-testthat

      Public
      to generate testthat file
      R
      •
      GNU General Public License v3.0
      •8•0•0•0•Updated Nov 29, 2023Nov 29, 2023

    • biobyte

      Public
      Training example for Biobyte
      R
      •
      BSD 2-Clause "Simplified" License
      •0•0•2•0•Updated Jul 31, 2023Jul 31, 2023

    • analysis_R-GECO1_CDPK-FRET

      Public
      Synchronisation analysis of R-GECO1 and CDPK-FRET in guard cells
      R
      •0•0•0•0•Updated Jun 26, 2023Jun 26, 2023

    • CRIMSy-CI

      Public
      Combined Chemistry DataBase Cartridges
      Dockerfile
      •
      Apache License 2.0
      •0•0•0•0•Updated May 17, 2022May 17, 2022

    • fasta-playground

      Public archive
      Test project for sequence library searching
      jsffastajavaserverfaes
      jsffastajavaserverfaes
      Java
      •
      Apache License 2.0
      •1•0•0•0•Updated Nov 24, 2021Nov 24, 2021

    • Show-And-Tell_Browser-Test-Automation

      Public
      Java
      •1•0•0•0•Updated Nov 5, 2021Nov 5, 2021
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