tutorials made for biologists to learn deep learning
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May 27, 2019 - Jupyter Notebook
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plant-science
Here are 41 public repositories matching this topic...
Materials of the course WBIO-A-08 Plant Bioinformatics
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Mar 5, 2026
Python package for Genome-Wide Association Studies (GWAS). Implements GLM, MLM, FarmCPU, and BLINK with support for VCF, PLINK, HapMap, and CSV genotype formats.
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Jul 9, 2026 - Python
SPIRO is a Smart Plate Imaging Robot
science raspberry-pi biology open-hardware microbiology arabidopsis plant-science biological-imaging
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May 20, 2026 - Python
Tools and Statistical Procedures in Plant Science
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Jul 28, 2026 - R
CropForge is an open-source, code-first virtual farm runtime that enables agricultural researchers to define, execute, and visually analyse crop simulations entirely from Python code. It is distributed as a pip-installable package and runs completely on the researcher's local machine.
simulation agriculture agronomy agriculture-research crop-modeling plant-science crop-simulation-models crop-simulation farming-systems
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Jul 14, 2026 - Python
Packages for graphics and index for seed germination ecophysiological evaluation
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May 5, 2026 - R
An R package to investigate the RNA mobilome & population-scale changes.
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Mar 4, 2026 - R
collection of functional annotation methods in plant genomics
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Feb 24, 2026 - Python
Codex skill for Chinese scientific manuscript humanizing, terminology protection, and evidence-strength review.
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May 16, 2026
Complete tissue culture & hydroponics toolkit — beginner walkthrough, 10 SOPs, sterilization calculator, media formulations, growth regulators, EC/pH tools. Zero deps.
typescript agriculture sop hydroponics nutrients bun plant-science beginner-guide sterilization tissue-culture fertigation ms-medium growth-regulators ph-calculator micropropagation
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Mar 8, 2026 - TypeScript
Beginner-first, peer-reviewed cannabis cultivation white papers — 33 self-contained interactive HTML guides on propagation, crop steering, environment, plant health, precision irrigation and GMP.
cannabis gmp hydroponics irrigation horticulture vpd cultivation plant-science white-papers indoor-growing crop-steering grow-guide cannabis-cultivation controlled-environment-agriculture led-grow-lights
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Jul 28, 2026 - HTML
Personal academic portfolio & research blog — Postdoctoral Scholar at UC Davis | Plant Science, Multi-Omics, Grapevine Virology
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Jul 23, 2026 - TypeScript
Plant science stomatal outreach game project
science biology plants leaves phaser3 plant-science stomata gas-exchange guardcells science-outreach
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Aug 23, 2020 - JavaScript
The Breeder Genomics Hub is a batteries-included JupyterHub distribution for breeders (Pangeo for plant scientists)
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Jul 8, 2026 - Python
A Jupyter Docker Stack for Plant Scientists and Breeders
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Aug 29, 2023 - Dockerfile
Provide precise nutrient mixes, equipment guides, and protocols for tissue culture and hydroponics with step-by-step support for beginners.
typescript agriculture v2 sop hydroponics nutrients bun plant-science beginner-guide sterilization tissue-culture fertigation ms-medium growth-regulators micropropagation fertigation-mix
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Jul 27, 2026 - TypeScript
R-based app for scraping gene annotation and transmembrane domain information of a large number of plant genes from ARAMEMNON
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Jul 31, 2024 - R
Calibrating plates for plant phenotyping and quality assurance using Petiole Pro
computer-vision agriculture artificial-intelligence farming forestry quality-assurance ecology plant-phenotyping plant-science
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Jun 16, 2025
My Github Portfolio and CV
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Apr 9, 2025 - HTML
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