MOM6 symmetric with ice shelf debugging #142

claireyung · 2025-08-27T05:57:17Z

do not merge!

This PR is to generate prereleases for MOM6 symmetric with ice shelves. Builds on #120 but rebased onto recent CD updates.

First commits get rid of debug mode from the above PR and then update the MOM6 to point to a version with small change to nuopc mom cap mom-ocean/MOM6@667aded

🚀 The latest prerelease access-om3/pr142-36 at f2a17e4 is here: #142 (comment) 🚀

…an merge and small index bug

…del-deployment-template/blob/main/spack.yaml

This reverts commit 3528122.

…p/mom_cap.F90

… shelf to read it

…-debug-example

ffflags instead of build_type=debug

Use spack-packages branch use-default-flag-handler Update access-generic-tracers and access-mocsy

…M3/tree/b751c08461cc95eb330b8b504aae0bd1f24a3c7e

…303cbec8441c0599f705fd09

github-actions · 2025-08-27T06:14:11Z

🚀 Attempted to deploy access-om3 Prerelease pr142-1 with commit e2d2c1f

🖥️ `Gadi` Deployment ❌

github-actions · 2025-08-27T07:30:58Z

🚀 Attempted to deploy access-om3 Prerelease pr142-2 with commit 579b4a1

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om3, defined in ./spack.yaml, will be deployed to Gadi as:

2025.05.001 as a Release (when merged).
pr142-2 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om3/pr142-2

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om3-pr142-2 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 97c26382fab997698a344b9aac364b8a4e7411df
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

Diff is 4899d3f...11938bd

github-actions · 2025-11-21T00:33:01Z

🚀 Attempted to deploy access-om3 Prerelease pr142-25 with commit 4e272cb

🖥️ `Gadi` Deployment ❌

claireyung · 2025-11-21T00:35:00Z

!redeploy

github-actions · 2025-11-21T01:38:31Z

🚀 Attempted to deploy access-om3 Prerelease pr142-26 with commit 4e272cb

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om3, defined in ./spack.yaml, will be deployed to Gadi as:

2025.08.000/3jaaghfgv as a Release (when merged).
pr142-26 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om3/pr142-26

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om3-pr142-26 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2025.08.003
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

github-actions · 2025-12-08T01:12:09Z

🚀 Attempted to deploy access-om3 Prerelease pr142-27 with commit 3935021

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om3, defined in ./spack.yaml, will be deployed to Gadi as:

2025.08.000/3jaaghfgv as a Release (when merged).
pr142-27 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om3/pr142-27

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om3-pr142-27 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2025.08.003
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

…ce shelf melt rate with a file

github-actions · 2025-12-10T02:47:58Z

🚀 Attempted to deploy access-om3 Prerelease pr142-28 with commit b35296e

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om3, defined in ./spack.yaml, will be deployed to Gadi as:

2025.08.000/3jaaghfgv as a Release (when merged).
pr142-28 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om3/pr142-28

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om3-pr142-28 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2025.08.003
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

claireyung · 2025-12-11T11:47:57Z

!redeploy

github-actions · 2025-12-11T13:15:25Z

🚀 Attempted to deploy access-om3 Prerelease pr142-29 with commit b35296e

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om3, defined in ./spack.yaml, will be deployed to Gadi as:

2025.08.000/3jaaghfgv as a Release (when merged).
pr142-29 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om3/pr142-29

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om3-pr142-29 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2025.08.003
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

github-actions · 2025-12-11T21:22:05Z

🚀 Attempted to deploy access-om3 Prerelease pr142-30 with commit 61eafdc

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om3, defined in ./spack.yaml, will be deployed to Gadi as:

2025.08.001 as a Release (when merged).
pr142-30 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om3/pr142-30

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om3-pr142-30 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2025.08.003
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

… parameterisation code

…tion velocity bugfix and frazil under ice shelf fix mom-ocean/MOM6@ef9ad05

github-actions · 2025-12-17T01:16:02Z

🚀 Attempted to deploy access-om3 Prerelease pr142-31 with commit 0455a71

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om3, defined in ./spack.yaml, will be deployed to Gadi as:

2025.08.001 as a Release (when merged).
pr142-31 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om3/pr142-31

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om3-pr142-31 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2025.08.003
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

github-actions · 2025-12-17T02:55:13Z

🚀 Attempted to deploy access-om3 Prerelease pr142-32 with commit 4cf65a8

🖥️ `Gadi` Deployment ❌

claireyung · 2025-12-17T03:00:22Z

!redeploy

github-actions · 2025-12-17T05:10:06Z

🚀 Attempted to deploy access-om3 Prerelease pr142-33 with commit 4cf65a8

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om3, defined in ./spack.yaml, will be deployed to Gadi as:

2025.08.001 as a Release (when merged).
pr142-33 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om3/pr142-33

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om3-pr142-33 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2025.08.003
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

…up Alex's friction velocity fix ACCESS-NRI/MOM6@851c39c

github-actions · 2026-01-08T23:46:23Z

🚀 Attempted to deploy access-om3 Prerelease pr142-34 with commit f2a17e4

🖥️ `Gadi` Deployment ❌

claireyung · 2026-01-08T23:49:47Z

!redeploy

claireyung · 2026-01-09T00:10:32Z

!redeploy

github-actions · 2026-01-09T02:34:12Z

🚀 Attempted to deploy access-om3 Prerelease pr142-36 with commit f2a17e4

🖥️ `Gadi` Deployment ✔️

Usage Instructions

access-om3, defined in ./spack.yaml, will be deployed to Gadi as:

2025.08.001 as a Release (when merged).
pr142-36 as a Prerelease (during this PR).

This Prerelease is accessible on Gadi using:

module use /g/data/vk83/prerelease/modules
module load access-om3/pr142-36

When using the above modules, the binaries shall be on your $PATH.

For advanced users, this Prerelease is also accessible on Gadi via /g/data/vk83/prerelease/apps/spack/0.22/spack in the access-om3-pr142-36 environment.
Due to inode-saving measures, one will have to manually untar the environment metadata before environment activation with tar -xf .spack-env .spack-env.tar. It will require one to have write privileges.

Configuration Information

This Prerelease is deployed using:

access-nri/spack on branch 0.22
access-nri/spack-packages version 2025.08.003
access-nri/spack-config version 2025.08.000

If the above was not what was expected, commit changes to config/versions.json in this PR.

Edward Yang and others added 23 commits August 27, 2025 15:40

+mom_symmetric

6e8e6e4

remove +mom_symmetric, +asymmetric_mem

b2fc7da

Change MOM6 commit reference in spack.yaml to add recent GFDL mom-oce…

219e7b6

…an merge and small index bug

Attempt to fix notation according to https://github.com/ACCESS-NRI/mo…

d7a0e27

…del-deployment-template/blob/main/spack.yaml

Update git version of MOM6 after Dougie rebased it

81fde52

Update to %[email protected]

649a2c8

Use %[email protected] for FMS only

2262c26

MOM6 with %[email protected], everything else with %[email protected]

b0514fb

Explicitly set compiler for each package

4750017

This should work too?

f04ab9f

Revert "This should work too?"

581ac44

This reverts commit 3528122.

Add MOM6 version with print statements in config_src/drivers/nuopc_ca…

2711750

…p/mom_cap.F90

Update code trying to set dirs%input_filename in nuopc cap to get ice…

4189742

… shelf to read it

Update git ref on MOM6 to no print statements

36320e5

Make a guess on how to make a debug executable cy-pananopt...om3-mom6…

061cbeb

…-debug-example

Try again removing debug mode for some components

a7e794e

Try changes in https://github.com/ACCESS-NRI/ACCESS-OM3/pull/97/files

bf6c988

ffflags instead of build_type=debug

Use %[email protected]

ebbaee3

Use spack-packages branch use-default-flag-handler Update access-generic-tracers and access-mocsy

Update cice to fix error found in debug build

9e8be86

Update spack.yaml

976fc51

Update spack.yaml

e7d376f

Remove debug mode ffflags from https://github.com/ACCESS-NRI/ACCESS-O…

33ca2e2

…M3/tree/b751c08461cc95eb330b8b504aae0bd1f24a3c7e

Point MOM6 to https://github.com/mom-ocean/MOM6/tree/667aded12584a68c…

e2d2c1f

…303cbec8441c0599f705fd09

claireyung had a problem deploying to Gadi Prerelease August 27, 2025 05:58 — with GitHub Actions Failure

remove gcc-runtime requiremnt

579b4a1

claireyung temporarily deployed to Gadi Prerelease August 27, 2025 06:17 — with GitHub Actions Inactive

Manually add Ed's flags from PR of panan optimisation #113

ccf5862

Diff is 4899d3f...11938bd

claireyung temporarily deployed to Gadi Prerelease August 29, 2025 01:57 — with GitHub Actions Inactive

claireyung had a problem deploying to Gadi Prerelease November 20, 2025 23:53 — with GitHub Actions Failure

Update esmf version d65fd93 that Angus found to fix segfaults

3935021

claireyung temporarily deployed to Gadi Prerelease December 7, 2025 23:37 — with GitHub Actions Inactive

Update MOM6 ref to ACCESS-NRI/MOM6@f7cb564 to allow for prescribing i…

b35296e

…ce shelf melt rate with a file

claireyung temporarily deployed to Gadi Prerelease December 10, 2025 01:14 — with GitHub Actions Inactive

Update spack yaml?

61eafdc

claireyung temporarily deployed to Gadi Prerelease December 11, 2025 19:55 — with GitHub Actions Inactive

Update MOM6 ref to ACCESS-NRI/MOM6@ee6bf46 to include bug fix to melt…

0455a71

… parameterisation code

claireyung temporarily deployed to Gadi Prerelease December 16, 2025 23:34 — with GitHub Actions Inactive

Update mom ref to ACCESS-NRI/MOM6@401ec5b to include Alex Huth's fric…

4cf65a8

…tion velocity bugfix and frazil under ice shelf fix mom-ocean/MOM6@ef9ad05

claireyung had a problem deploying to Gadi Prerelease December 17, 2025 01:19 — with GitHub Actions Failure

Update mom6 ref to not use the new frazil formulation but still pick …

f2a17e4

…up Alex's friction velocity fix ACCESS-NRI/MOM6@851c39c

claireyung had a problem deploying to Gadi Prerelease January 8, 2026 22:52 — with GitHub Actions Failure

claireyung temporarily deployed to Gadi Prerelease January 9, 2026 00:57 — with GitHub Actions Inactive

MOM6 symmetric with ice shelf debugging #142

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