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Add software event with the state of the patch used to sample reward #429

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Merged
bruno-f-cruz merged 1 commit into from
Oct 13, 2025
Merged

Add software event with the state of the patch used to sample reward #429

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60 changes: 37 additions & 23 deletions src/Extensions/InstantiateSite.bonsai
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Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,8 @@
xmlns:p1="clr-namespace:AindVrForagingDataSchema;assembly=Extensions"
xmlns:dsp="clr-namespace:Bonsai.Dsp;assembly=Bonsai.Dsp"
xmlns:harp="clr-namespace:Bonsai.Harp;assembly=Bonsai.Harp"
xmlns:p2="clr-namespace:Bonsai.Numerics.Distributions;assembly=Bonsai.Numerics"
xmlns:p2="clr-namespace:AllenNeuralDynamics.Core;assembly=AllenNeuralDynamics.Core"
xmlns:p3="clr-namespace:Bonsai.Numerics.Distributions;assembly=Bonsai.Numerics"
xmlns:bv="clr-namespace:BonVision;assembly=BonVision"
xmlns="https://bonsai-rx.org/2018/workflow">
<Workflow>
Expand Down Expand Up @@ -849,20 +850,31 @@ it.Item2 as EntryPosition)</scr:Expression>
<Expression xsi:type="SubscribeSubject">
<Name>patchState</Name>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="p2:CreateSoftwareEvent">
<p2:EventName>PatchStateAtReward</p2:EventName>
</Combinator>
</Expression>
<Expression xsi:type="MulticastSubject">
<Name>SoftwareEvent</Name>
</Expression>
<Expression xsi:type="SubscribeSubject">
<Name>patchState</Name>
</Expression>
<Expression xsi:type="MemberSelector">
<Selector>Probability</Selector>
</Expression>
<Expression xsi:type="SubscribeSubject">
<Name>RngSeed</Name>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="p2:CreateContinuousUniform">
<p2:Lower>0</p2:Lower>
<p2:Upper>1</p2:Upper>
<Combinator xsi:type="p3:CreateContinuousUniform">
<p3:Lower>0</p3:Lower>
<p3:Upper>1</p3:Upper>
</Combinator>
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="p2:Sample" />
<Combinator xsi:type="p3:Sample" />
</Expression>
<Expression xsi:type="Combinator">
<Combinator xsi:type="rx:Zip" />
Expand Down Expand Up @@ -972,31 +984,33 @@ it.Item2 as EntryPosition)</scr:Expression>
<Edge From="3" To="4" Label="Source2" />
<Edge From="4" To="5" Label="Source1" />
<Edge From="6" To="7" Label="Source1" />
<Edge From="7" To="11" Label="Source1" />
<Edge From="8" To="9" Label="Source1" />
<Edge From="7" To="8" Label="Source1" />
<Edge From="9" To="10" Label="Source1" />
<Edge From="10" To="11" Label="Source2" />
<Edge From="10" To="14" Label="Source1" />
<Edge From="11" To="12" Label="Source1" />
<Edge From="11" To="13" Label="Source1" />
<Edge From="12" To="13" Label="Source2" />
<Edge From="13" To="14" Label="Source1" />
<Edge From="14" To="17" Label="Source1" />
<Edge From="15" To="16" Label="Source1" />
<Edge From="16" To="17" Label="Source2" />
<Edge From="17" To="18" Label="Source1" />
<Edge From="17" To="26" Label="Source1" />
<Edge From="12" To="13" Label="Source1" />
<Edge From="13" To="14" Label="Source2" />
<Edge From="14" To="15" Label="Source1" />
<Edge From="14" To="16" Label="Source1" />
<Edge From="15" To="16" Label="Source2" />
<Edge From="16" To="17" Label="Source1" />
<Edge From="17" To="20" Label="Source1" />
<Edge From="18" To="19" Label="Source1" />
<Edge From="19" To="22" Label="Source1" />
<Edge From="19" To="20" Label="Source2" />
<Edge From="20" To="21" Label="Source1" />
<Edge From="21" To="22" Label="Source2" />
<Edge From="22" To="23" Label="Source1" />
<Edge From="20" To="29" Label="Source1" />
<Edge From="21" To="22" Label="Source1" />
<Edge From="22" To="25" Label="Source1" />
<Edge From="23" To="24" Label="Source1" />
<Edge From="24" To="25" Label="Source1" />
<Edge From="25" To="28" Label="Source1" />
<Edge From="24" To="25" Label="Source2" />
<Edge From="25" To="26" Label="Source1" />
<Edge From="26" To="27" Label="Source1" />
<Edge From="27" To="28" Label="Source2" />
<Edge From="28" To="29" Label="Source1" />
<Edge From="27" To="28" Label="Source1" />
<Edge From="28" To="31" Label="Source1" />
<Edge From="29" To="30" Label="Source1" />
<Edge From="30" To="31" Label="Source2" />
<Edge From="31" To="32" Label="Source1" />
<Edge From="32" To="33" Label="Source1" />
</Edges>
</Workflow>
</Expression>
Expand Down
7 changes: 7 additions & 0 deletions src/aind_behavior_vr_foraging/data_contract/v0_6_0.py
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Original file line number Diff line number Diff line change
Expand Up @@ -337,6 +337,13 @@ def dataset(
root_path / "behavior/SoftwareEvents/SpoutParkingPositions.json"
),
),
SoftwareEvents(
name="PatchStateAtReward",
description="An event emitted whenever the reward is about to be given and the patch state is sampled.",
reader_params=SoftwareEvents.make_params(
root_path / "behavior/SoftwareEvents/PatchStateAtReward.json"
),
),
],
),
DataStreamCollection(
Expand Down