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Danuser Lab edited this page Sep 24, 2024 · 12 revisions

Installing MATLAB

We recommend using MATLAB 2021a or newer. You can download MATLAB from the Mathworks website. If your institution does not have a license, you can temporarily use a trial version.

Cloning Git Repository

  • For Windows-based machines, install Git for Windows
  • Install GitHub Desktop (not available on Linux)
  • Using GitHub Desktop, clone the DanuserLab u-probe Repository with GitHub Desktop

Click Current Repository, Add, Clone Repository, and provide URL for DanuserLab u-probe Repository (e.g., https://github.com/DanuserLab/u-probe.git). Select where you will save the data. We recommend that you save it to to the default location for MATLAB, which is often within your Documents folder (e.g., ~/Documents/MATLAB).

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Adding u-probe Repository to MATLAB Path.

MATLAB needs to know where to look for the u-probe software. Thus, you will need to add the repository to the MATLAB path. To do this, open the MATLAB software. In the command window, type the command addpath(genpath('path/to/the/u-probe/repository'))

Lyda Hill Department of Bioinformatics and Cecil H. and Ida Green Center for Systems Biology

University of Texas Southwestern Medical Center

Dallas, TX. 75390

Feedback: danusersoftware@utsouthwestern.edu

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