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add checking and setting restart flag in CICE6 config file in gcm_run #724

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Merged
sdrabenh merged 6 commits into from
Jun 27, 2025
Merged

add checking and setting restart flag in CICE6 config file in gcm_run #724

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7dbf562
add checking and setting restart flag in ice_in in gcm_run
zhaobin74 May 5, 2025
787b213
Add Baselibs bin dir to PATH
mathomp4 May 6, 2025
312fb10
Merge branch 'develop' into feature/zhaobin74/cice6-config-upd
sdrabenh Jun 4, 2025
d94d8ca
Merge branch 'develop' into feature/zhaobin74/cice6-config-upd
sdrabenh Jun 25, 2025
d31c896
Merge branch 'develop' into feature/zhaobin74/cice6-config-upd
sdrabenh Jun 25, 2025
818c156
Merge branch 'develop' into feature/zhaobin74/cice6-config-upd
sdrabenh Jun 26, 2025
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11 changes: 11 additions & 0 deletions gcm_run.j
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Original file line number Diff line number Diff line change
Expand Up @@ -37,6 +37,7 @@ setenv @LD_LIBRARY_PATH_CMD ${LD_LIBRARY_PATH}:${GEOSDIR}/lib
# We only add BASEDIR to the @LD_LIBRARY_PATH_CMD if BASEDIR is defined (i.e., not running with Spack)
if ( $?BASEDIR ) then
setenv @LD_LIBRARY_PATH_CMD ${@LD_LIBRARY_PATH_CMD}:${BASEDIR}/${ARCH}/lib
setenv PATH ${PATH}:${BASEDIR}/${ARCH}/bin
endif

setenv RUN_CMD "@RUN_CMD"
Expand Down Expand Up @@ -841,6 +842,16 @@ endif
#ln -sf $SSTDIR/dataoceanfile_MERRA2_SST.${OGCM_IM}x${OGCM_JM}.${yy}.data sst.data
#ln -sf $SSTDIR/dataoceanfile_MERRA2_ICE.${OGCM_IM}x${OGCM_JM}.${yy}.data fraci.data

@CICE6 #detect exisistence of certain fields in CICE6 restart
@CICE6 ncdump -h INPUT/iced.nc | grep 'apnd' > /dev/null
@CICE6 if( $status == 0 ) then
@CICE6 echo 'pond state in restart, turn on restart flag if not already'
@CICE6 sed -i -E 's/^[[:space:]]*restart_pond_lvl[[:space:]]*=[[:space:]]*\.false\./ restart_pond_lvl = .true./' ice_in
@CICE6 else
@CICE6 echo 'pond state NOT in restart, turn off restart flag if already on'
@CICE6 sed -i -E 's/^[[:space:]]*restart_pond_lvl[[:space:]]*=[[:space:]]*\.true\./ restart_pond_lvl = .false./' ice_in
@CICE6 endif

#######################################################################
# Split Saltwater Restart if detected
#######################################################################
Expand Down