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@msarkis-icr msarkis-icr requested a review from rachelicr December 9, 2024 16:11
@msarkis-icr msarkis-icr linked an issue Dec 9, 2024 that may be closed by this pull request
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How does the user specify

  • working directory
  • final results directory
    i.e. ensuring one user doesn't overwrite another's? Or actively deciding that they do and there is only 1 result per project?

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How does the user specify

  • working directory
  • final results directory
    i.e. ensuring one user doesn't overwrite another's? Or actively deciding that they do and there is only 1 result per project?

For the moment we didn't open this possibility for the user to specify an output directory.
We need to review our existing scripts first (i.e., parametrise them): I was thinking to do this change in a separate issue --> #4

@msarkis-icr msarkis-icr merged commit a61d8e6 into main Dec 9, 2024
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[RSE-Dev]: Update nextflow-app to access the right project script

3 participants