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5f5ea21
removed attach from tests
DanChaltiel Jul 25, 2025
e2ac748
hard rework to get unseen grades
DanChaltiel Jul 25, 2025
41109a0
update test snapshots
DanChaltiel Jul 25, 2025
8f1b6db
oops
DanChaltiel Jul 25, 2025
0c26709
add a snapshot with missing values and grades
DanChaltiel Jul 25, 2025
605c759
moved test options to setup.R
DanChaltiel Jul 28, 2025
4002eb0
changed labels for missing AE grades
DanChaltiel Jul 28, 2025
9a60eb0
migrate ae_plot_grade() to another file
DanChaltiel Jul 28, 2025
cc82d32
temp file
DanChaltiel Jul 30, 2025
5aae813
Merge branch 'AE-grade-table-all-grades' of https://github.com/Oncost…
DanChaltiel Jul 31, 2025
85b8faf
improve assert_names_exists to use on lists
DanChaltiel Aug 23, 2025
5186a2b
switch versions, use legacy with ae_table_grade_bak()
DanChaltiel Aug 23, 2025
b053090
merge the rewrite (this is a bad commit)
DanChaltiel Aug 23, 2025
0201902
doc
DanChaltiel Aug 23, 2025
b75ad76
update tests
DanChaltiel Aug 23, 2025
19b6332
use grstat_example() only once in tests
DanChaltiel Aug 23, 2025
1758e5f
adapt ae_table_plot
DanChaltiel Aug 23, 2025
0fb780a
update snapshots
DanChaltiel Aug 23, 2025
11ade42
declare db_test in init, not setup.R
DanChaltiel Aug 23, 2025
fdb7950
generalize the use of db_test
DanChaltiel Aug 23, 2025
02a555f
Update ae-tables.md
DanChaltiel Aug 23, 2025
78c020d
update vignette
DanChaltiel Aug 23, 2025
0e524bb
fix for check
DanChaltiel Aug 24, 2025
5b2c7e4
assign db_test to global envir
DanChaltiel Sep 12, 2025
9e26e00
test ae_table_grade on cumsum sup/max
DanChaltiel Sep 12, 2025
913bd19
format
DanChaltiel Sep 12, 2025
fef726f
fix case when arm has no label
DanChaltiel Sep 12, 2025
2075f26
fix case when an arm is named "Total" and total=TRUE
DanChaltiel Sep 12, 2025
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8 changes: 8 additions & 0 deletions NAMESPACE
Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
# Generated by roxygen2: do not edit by hand

S3method(as_flextable,ae_table_grade)
S3method(as_flextable,ae_table_soc)
S3method(print,check_recist)
export("%>%")
Expand All @@ -8,6 +9,7 @@ export(ae_plot_grade_n)
export(ae_plot_grade_sum)
export(ae_plot_soc)
export(ae_table_grade)
export(ae_table_grade_bak)
export(ae_table_soc)
export(as_flextable)
export(boin_plot)
Expand Down Expand Up @@ -86,6 +88,7 @@ importFrom(flextable,font)
importFrom(flextable,fontsize)
importFrom(flextable,hline)
importFrom(flextable,hline_bottom)
importFrom(flextable,hline_top)
importFrom(flextable,merge_h)
importFrom(flextable,merge_v)
importFrom(flextable,padding)
Expand Down Expand Up @@ -193,15 +196,20 @@ importFrom(tibble,as_tibble_row)
importFrom(tibble,deframe)
importFrom(tibble,enframe)
importFrom(tibble,lst)
importFrom(tibble,remove_rownames)
importFrom(tibble,tibble)
importFrom(tidyr,build_wider_spec)
importFrom(tidyr,complete)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,pivot_wider_spec)
importFrom(tidyr,replace_na)
importFrom(tidyr,separate_rows)
importFrom(tidyr,separate_wider_regex)
importFrom(tidyr,unite)
importFrom(tidyr,unnest)
importFrom(tidyr,unnest_longer)
importFrom(tidyr,unpack)
importFrom(tidyselect,all_of)
importFrom(tidyselect,everything)
importFrom(tidyselect,matches)
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