Lace 1.14.1

Bug fixes to allow Lace to run on the command line outside python
Fixes version of networkx to 2.3 to avoid issues with 2.4

Lace 1.14.0

This version makes Lace consistent with python package conventions.
No changes were introduced to the method compared to version 1.13.

Lace v1.13

Fixes several bugs found in release 1.11, mostly involving incomplete annotation as well as a rare bug which can cause the program to stall on some clusters.

Lace v1.11

This version should work with networkx 2

Lace v1.10

Includes some computational performance improvements over the previous version.

Lace v1.00

Lace version 1.00 (the version used in our paper). The software is released under GPL version 3.

Lace v0.99

Here is the tool for your superTranscript adventures....

This is the final version before being "officially" considered production ready, whatever that means, as often with most bioinformatics there are constantly tweaks and improvements to be made. However, the tool has mean successfully used by many external users, and their feedback and problems helped in the fine tuning of the software.

I hope with this tool you will be able to lace your research with exciting discoveries, remember Seq and you shall find...

Lace v 0.80

A newly updated Lace, based on some feedback from the first trial users. Hooray! Most substantially in how to deal with lacing together clusters with only two opposite stranded transcripts. Previous Lace vestions had not compactified the SuperTranscripts as optimally as possible.

Lace v 0.76

The first semi-stable, internally tested code. Utilised for the BioArxiv draft paper. The code should be more widely tested in different settings and environments, and more people trying to break it before acquiring that sought after release status v 1.0.

Lace v 0.75

The first semi-stable, internally tested code. Utilised for the BioArxiv draft paper. The code should be more widely tested in different settings and environments, and more people trying to break it before acquiring that sought after release status v 1.0.