Add 'arch' optional arg to miniconda template

.gitignore

@@ -146,3 +146,5 @@ cython_debug/
 
 # Pycharm
 .idea/
+
+.vscode

neurodocker/cli/generate.py

@@ -9,6 +9,7 @@
 
 import json as json_lib
 import sys
+import typing as ty
 from pathlib import Path
 from typing import IO, Any, Optional, Type, cast
 
@@ -28,6 +29,9 @@
 from neurodocker.reproenv.template import Template
 from neurodocker.reproenv.types import allowed_pkg_managers
 
+if ty.TYPE_CHECKING:
+    from click.parser import ParsingState
+
 
 class GroupAddCommonParamsAndRegisteredTemplates(click.Group):
     """Subclass of `click.Group` that adds parameters common to `reproenv generate`
@@ -137,17 +141,17 @@ def __init__(self, *args, **kwargs):
         self._eat_all_parser = None
 
     def add_to_parser(self, parser, ctx):
-        def parser_process(value, state: click.parser.ParsingState):
+        def parser_process(value, state: ParsingState):
             # method to hook to the parser.process
             done = False
             value = [value]
             # grab everything up to the next option
-            while state.rargs and not done:
+            while state.rargs and not done:  # type: ignore[attr-defined]
                 for prefix in self._eat_all_parser.prefixes:
-                    if state.rargs[0].startswith(prefix):
+                    if state.rargs[0].startswith(prefix):  # type: ignore[attr-defined]
                         done = True
                 if not done:
-                    value.append(state.rargs.pop(0))
+                    value.append(state.rargs.pop(0))  # type: ignore[attr-defined]
             value = tuple(value)
             # call the actual process
             self._previous_parser_process(value, state)

neurodocker/templates/ants.yaml

@@ -10,7 +10,6 @@ binaries:
         optional:
             install_path: /opt/ants-{{ self.version }}
     urls:
-
     # Official binaries are provided as of 2.4.1 (https://github.com/ANTsX/ANTs/releases)
         2.6.2: https://github.com/ANTsX/ANTs/releases/download/v2.6.2/ants-2.6.2-centos7-X64-gcc.zip
         2.6.1: https://github.com/ANTsX/ANTs/releases/download/v2.6.1/ants-2.6.1-centos7-X64-gcc.zip

neurodocker/templates/miniconda.yaml

@@ -5,8 +5,8 @@ name: miniconda
 url: https://docs.conda.io/projects/miniconda/en/latest/
 binaries:
     urls:
-        latest: https://repo.continuum.io/miniconda/Miniconda3-{{ self.version }}-Linux-x86_64.sh
-        '*': https://repo.continuum.io/miniconda/Miniconda3-{{ self.version }}-Linux-x86_64.sh
+        latest: https://repo.continuum.io/miniconda/Miniconda3-{{ self.version }}-Linux-{{ self.arch }}.sh
+        '*': https://repo.continuum.io/miniconda/Miniconda3-{{ self.version }}-Linux-{{ self.arch }}.sh
     env:
         CONDA_DIR: '{{ self.install_path }}'
         PATH: '{{ self.install_path }}/bin:$PATH'
@@ -34,6 +34,7 @@ binaries:
             pip_opts: ''
             yaml_file: ''
             mamba: 'false'
+            arch: x86_64
     instructions: |
         {% if not self.installed.lower() in ["true", "y", "1"] -%}
         {{ self.install_dependencies() }}