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[circle-mlir/infra] Bump h5py to 3.12.1 for Python 3.13 support #16433

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[circle-mlir/infra] Bump h5py to 3.12.1 for Python 3.13 support #16433

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3 changes: 2 additions & 1 deletion circle-mlir/infra/docker/focal/Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -32,6 +32,7 @@ ARG VER_TORCH=2.7.0+cpu
ARG VER_ONNX=1.18.0
ARG VER_ONNXRUNTIME=1.21.1
ARG VER_NUMPY=1.26.4
ARG VER_H5PY=3.12.1

# Clean archives (to reduce image size)
RUN apt-get clean -y
Expand Down Expand Up @@ -60,7 +61,7 @@ RUN ${WORK_DIR}/venv/bin/python3 -m pip install --upgrade pip setuptools
RUN ${WORK_DIR}/venv/bin/python3 -m pip install numpy==${VER_NUMPY} torch==${VER_TORCH} \
-f https://download.pytorch.org/whl/torch
RUN ${WORK_DIR}/venv/bin/python3 -m pip install onnx==${VER_ONNX} onnxruntime==${VER_ONNXRUNTIME} \
h5py==3.8.0 einops
h5py==${VER_H5PY} einops

# Download experimental patch file for onnx-mlir

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3 changes: 2 additions & 1 deletion circle-mlir/infra/docker/jammy/Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -29,6 +29,7 @@ ARG VER_TORCH=2.7.0+cpu
ARG VER_ONNX=1.18.0
ARG VER_ONNXRUNTIME=1.21.1
ARG VER_NUMPY=1.26.4
ARG VER_H5PY=3.12.1

# Clean archives (to reduce image size)
RUN apt-get clean -y
Expand All @@ -52,7 +53,7 @@ RUN ${WORK_DIR}/venv/bin/python3 -m pip install --upgrade pip setuptools
RUN ${WORK_DIR}/venv/bin/python3 -m pip install numpy==${VER_NUMPY} torch==${VER_TORCH} \
-f https://download.pytorch.org/whl/torch
RUN ${WORK_DIR}/venv/bin/python3 -m pip install onnx==${VER_ONNX} onnxruntime==${VER_ONNXRUNTIME} \
h5py==3.8.0 einops
h5py==${VER_H5PY} einops

# Download experimental patch file for onnx-mlir

Expand Down
3 changes: 2 additions & 1 deletion circle-mlir/infra/docker/noble/Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -29,6 +29,7 @@ ARG VER_TORCH=2.7.0+cpu
ARG VER_ONNX=1.18.0
ARG VER_ONNXRUNTIME=1.21.1
ARG VER_NUMPY=1.26.4
ARG VER_H5PY=3.12.1

# Clean archives (to reduce image size)
RUN apt-get clean -y
Expand All @@ -52,7 +53,7 @@ RUN ${WORK_DIR}/venv/bin/python3 -m pip install --upgrade pip setuptools
RUN ${WORK_DIR}/venv/bin/python3 -m pip install numpy==${VER_NUMPY} torch==${VER_TORCH} \
-f https://download.pytorch.org/whl/torch
RUN ${WORK_DIR}/venv/bin/python3 -m pip install onnx==${VER_ONNX} onnxruntime==${VER_ONNXRUNTIME} \
h5py==3.8.0 einops
h5py==${VER_H5PY} einops

# Download experimental patch file for onnx-mlir

Expand Down
8 changes: 6 additions & 2 deletions circle-mlir/infra/overlay/prepare-venv
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Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,7 @@
# use +e as python3.10 may not exist in the system and 'command' will return error.
set +e

PYTHON_CANDIDATES=("python3.12" "python3.10" "python3")
PYTHON_CANDIDATES=("python3.13" "python3.12" "python3.10" "python3")
for py in "${PYTHON_CANDIDATES[@]}"; do
PYTHON3_EXEC=$(command -v "$py")
if [[ -n "${PYTHON3_EXEC}" ]]; then
Expand Down Expand Up @@ -56,6 +56,7 @@ VER_TORCH=2.7.0+cpu
VER_ONNX=1.18.0
VER_ONNXRUNTIME=1.21.1
VER_NUMPY=1.26.4
VER_H5PY=3.12.1

PYTHON_VERSION=$($VENV_PYTHON -c "import sys; print(f'{sys.version_info.major}.{sys.version_info.minor}')")
echo "python3 version is $PYTHON_VERSION"
Expand All @@ -66,6 +67,9 @@ if [[ "$PYTHON_VERSION" == "3.10" ]]; then
elif [[ "$PYTHON_VERSION" == "3.12" ]]; then
# Ubuntu 24.04 is python3.12
: # use as is
elif [[ "$PYTHON_VERSION" == "3.13" ]]; then
# Ubuntu 25.04 is python3.13
: # use as is
else
echo "Error prepare-venv: Unsupported python version: $PYTHON_VERSION"
exit 1
Expand All @@ -90,7 +94,7 @@ fi
PYTHON_PACKAGES="torch==${VER_TORCH} "
PYTHON_PACKAGES+="onnx==${VER_ONNX} "
PYTHON_PACKAGES+="onnxruntime==${VER_ONNXRUNTIME} "
PYTHON_PACKAGES+="h5py==3.8.0 "
PYTHON_PACKAGES+="h5py==${VER_H5PY} "
PYTHON_PACKAGES+="einops "
PYTHON_PACKAGES+="numpy==${VER_NUMPY} "

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