adding table2asn version 1.29.324

[erinyoung]

There's a new version of table2asn!

There aren't release notes, but sqlite is now a dependency.

I copied the files from the prior version, and updated the version args.

The full diff

$ diff build-files/ncbi-table2asn/1.29.*/Dockerfile
1c1
< ARG RELEASE_DATE="2025-03-03"
---
> ARG RELEASE_DATE="2025-09-16"
7c7
< ARG TABLE2ASN_VER="1.29.1151"
---
> ARG TABLE2ASN_VER="1.29.324"
24c24,25
<   libidn12 && \
---
>   libidn12 \
>   libsqlite3-0 && \

Pull Request (PR) checklist:

• Include a description of what is in this pull request in this message.
• The dockerfile successfully builds to a test target for the user creating the PR. (i.e. docker build --tag samtools:1.15test --target test docker-builds/build-files/samtools/1.15 )
• Directory structure as name of the tool in lower case with special characters removed with a subdirectory of the version number in build-files (i.e. docker-builds/build-files/spades/3.12.0/Dockerfile)
  • (optional) All test files are located in same directory as the Dockerfile (i.e. build-files/shigatyper/2.0.1/test.sh)
• Create a simple container-specific README.md in the same directory as the Dockerfile (i.e. docker-builds/build-files/spades/3.12.0/README.md)
  • If this README is longer than 30 lines, there is an explanation as to why more detail was needed
• Dockerfile includes the recommended LABELS
• Main README.md has been updated to include the tool and/or version of the dockerfile(s) in this PR
• Program_Licenses.md contains the tool(s) used in this PR and has been updated for any missing

[kapsakcj]

Looks like the tests passed:

#12 [test 3/3] RUN wget https://ftp.ncbi.nlm.nih.gov/asn1-converters/versions/2025-09-16/documentation/short.fsa &&   wget https://ftp.ncbi.nlm.nih.gov/asn1-converters/versions/2025-09-16/documentation/SubmissionTemplate.sbt &&   table2asn -i short.fsa  &&   table2asn -t SubmissionTemplate.sbt -i short.fsa -o helicase.sqn
#12 0.047 --2025-12-30 19:28:31--  https://ftp.ncbi.nlm.nih.gov/asn1-converters/versions/2025-09-16/documentation/short.fsa
#12 0.050 Resolving ftp.ncbi.nlm.nih.gov (ftp.ncbi.nlm.nih.gov)... 130.14.250.12, 130.14.250.31, 130.14.250.7, ...
#12 0.124 Connecting to ftp.ncbi.nlm.nih.gov (ftp.ncbi.nlm.nih.gov)|130.14.250.12|:443... connected.
#12 0.264 HTTP request sent, awaiting response... 200 OK
#12 0.403 Length: 13972 (14K)
#12 0.403 Saving to: 'short.fsa'
#12 0.403 
#12 0.403      0K .......... ...                                        100%  351K=0.04s
#12 0.442 
#12 0.443 2025-12-30 19:28:32 (351 KB/s) - 'short.fsa' saved [13972/13972]
#12 0.443 
#12 0.447 --2025-12-30 19:28:32--  https://ftp.ncbi.nlm.nih.gov/asn1-converters/versions/2025-09-16/documentation/SubmissionTemplate.sbt
#12 0.449 Resolving ftp.ncbi.nlm.nih.gov (ftp.ncbi.nlm.nih.gov)... 130.14.250.31, 130.14.250.7, 130.14.250.10, ...
#12 0.451 Connecting to ftp.ncbi.nlm.nih.gov (ftp.ncbi.nlm.nih.gov)|130.14.250.31|:443... connected.
#12 0.591 HTTP request sent, awaiting response... 200 OK
#12 0.730 Length: 2039 (2.0K)
#12 0.730 Saving to: 'SubmissionTemplate.sbt'
#12 0.730 
#12 0.730      0K .                                                     100% 1.49G=0s
#12 0.730 
#12 0.730 2025-12-30 19:28:32 (1.49 GB/s) - 'SubmissionTemplate.sbt' saved [2039/2039]
#12 0.730 
#12 0.735 Will be using one threads
#12 0.738 Falling back on built-in data for popular organisms.
#12 0.743 Will be using one threads
#12 0.747 Falling back on built-in data for popular organisms.
#12 DONE 0.8s

[kapsakcj]

Maybe delete this comment line? looks like carry over from the last dockerfile

[erinyoung]

I think it may be even older than the last Dockerfile. I've updated it for clarity.

[kapsakcj]

thank you!

[kapsakcj]

Thanks for this PR. Deploy workflow here: https://github.com/StaPH-B/docker-builds/actions/runs/20725750992