Update Pod5 to version 0.3.36

[cwoodside1278]

Pull Request (PR) checklist:

• Include a description of what is in this pull request in this message.
• The dockerfile successfully builds to a test target for the user creating the PR. (i.e. docker build --tag samtools:1.15test --target test docker-builds/build-files/samtools/1.15 )
• Directory structure as name of the tool in lower case with special characters removed with a subdirectory of the version number in build-files (i.e. docker-builds/build-files/spades/3.12.0/Dockerfile)
  • (optional) All test files are located in same directory as the Dockerfile (i.e. build-files/shigatyper/2.0.1/test.sh)
• Create a simple container-specific README.md in the same directory as the Dockerfile (i.e. docker-builds/build-files/spades/3.12.0/README.md)
  • If this README is longer than 30 lines, there is an explanation as to why more detail was needed
• Dockerfile includes the recommended LABELS
• Main README.md has been updated to include the tool and/or version of the dockerfile(s) in this PR
• Program_Licenses.md contains the tool(s) used in this PR and has been updated for any missing

Description

Updated pod5 to 0.3.36 version from 0.3.34

• created new directory structure pod5/0.3.36
• changed to python:3.10-slim because pod5 only uses python 10 or higher
• Updated the container-specific read me to pod5/0.3.36
• Updated the main read me to include the new version

Diff Output

diff -r build-files/pod5/0.3.36/Dockerfile build-files/pod5/0.3.34/Dockerfile
1c1
< FROM python:3.10-slim AS app
---
> FROM python:3.9.17-slim AS app
6c6
< ARG POD5_TOOLS_VERSION="0.3.36"
---
> ARG POD5_TOOLS_VERSION="0.3.34"
8c8
< LABEL base.image="python:3.10-slim"
---
> LABEL base.image="python:3.9.17-slim"
diff -r build-files/pod5/0.3.36/README.md build-files/pod5/0.3.34/README.md
8c8
< - python 3.10.0
---
> - python 3.9.17

Test Output

=> [test 1/4] WORKDIR /test                                                                                                                                                    0.0s 
 => [test 2/4] RUN pod5 --help &&     pod5 --version                                                                                                                            0.7s 
 => [test 3/4] RUN wget https://github.com/nanoporetech/dorado/raw/release-v0.7/tests/data/pod5/dna_r10.4.1_e8.2_260bps/dna_r10.4.1_e8.2_260bps-FLO_PRO114-SQK_NBD114_96_260-4  0.5s 
 => [test 4/4] RUN pod5 view . --include "read_id, channel" --output summary.tsv &&     pod5 subset . --summary summary.tsv --columns channel                                   1.5s 
 => exporting to image                                                                                                                                                         21.7s 
 => => exporting layers                                                                                                                                                        18.1s 
 => => exporting manifest sha256:e2af6a44184d32f17ef7f82edc57ae3725301a1fbff9a33117f46545decff143                                                                               0.0s 
 => => exporting config sha256:6997e1c3dd5eb2c7caafbe5797edaa31e8ae4782a143343af4561061c7d326c6                                                                                 0.0s 
 => => exporting attestation manifest sha256:4f56355cb9e39843c732ad7c65a5397278ed5c7a8a6a3a8589fc534bbc5f36ee                                                                   0.0s
 => => exporting manifest list sha256:b17bb4999cd8d7659e93a51edf999e9009e4626efb5609618fe4a02e1627febd                                                                          0.0s
 => => naming to docker.io/library/pod5:0.3.36                                                                                                                                  0.0s
 => => unpacking to docker.io/library/pod5:0.3.36