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Polypolish bwa 0.6.1#1611

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Kincekara merged 3 commits intoStaPH-B:masterfrom
RaheelSyedAhmed:polypolish-bwa-0.6.1
Mar 31, 2026
Merged

Polypolish bwa 0.6.1#1611
Kincekara merged 3 commits intoStaPH-B:masterfrom
RaheelSyedAhmed:polypolish-bwa-0.6.1

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@RaheelSyedAhmed
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Pull Request (PR) checklist:

  • Include a description of what is in this pull request in this message.
  • The dockerfile successfully builds to a test target for the user creating the PR. (i.e. docker build --tag samtools:1.15test --target test docker-builds/build-files/samtools/1.15 )
  • Directory structure as name of the tool in lower case with special characters removed with a subdirectory of the version number in build-files (i.e. docker-builds/build-files/spades/3.12.0/Dockerfile)
    • (optional) All test files are located in same directory as the Dockerfile (i.e. build-files/shigatyper/2.0.1/test.sh)
  • Create a simple container-specific README.md in the same directory as the Dockerfile (i.e. docker-builds/build-files/spades/3.12.0/README.md)
    • If this README is longer than 30 lines, there is an explanation as to why more detail was needed
  • Dockerfile includes the recommended LABELS
  • Main README.md has been updated to include the tool and/or version of the dockerfile(s) in this PR
  • Program_Licenses.md contains the tool(s) used in this PR and has been updated for any missing

This PR is to add a dockerfile of polypolish with BWA for version 0.6.1.

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@Kincekara Kincekara left a comment

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The tests look good! I have no changes to recommend.

@Kincekara Kincekara merged commit 8be4e7b into StaPH-B:master Mar 31, 2026
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@Kincekara
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Closes #1605

@Kincekara
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Thank you for your PR!
You can check the image deployment here: https://github.com/StaPH-B/docker-builds/actions/runs/23816335918

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2 participants