Not showing meta-analysis experiments in creating score set dropdown menu.

src/mavedb/lib/experiments.py

@@ -1,7 +1,7 @@
 import logging
 from typing import Optional
 
-from sqlalchemy import func, or_
+from sqlalchemy import func, or_, not_
 from sqlalchemy.orm import Session
 
 from mavedb.lib.logging.context import logging_context, save_to_logging_context
@@ -99,6 +99,17 @@ def search_experiments(
             )
         )
 
+    if search.meta_analysis is not None:
+        if not search.meta_analysis:
+            query = query.filter(
+                or_(
+                    # Keep experiments without any score sets
+                    not_(Experiment.score_sets.any()),
+                    # Keep experiments where score sets exist but have no meta_analyzes_score_sets
+                    Experiment.score_sets.any(not_(ScoreSet.meta_analyzes_score_sets.any()))
+                )
+            )
+
     items: list[Experiment] = query.order_by(Experiment.urn, Experiment.title).all()
     if not items:
         items = []

src/mavedb/routers/experiments.py

@@ -43,45 +43,6 @@
 )
 
 
-# TODO: Rewrite this function.
-@router.get(
-    "/experiments/",
-    status_code=200,
-    response_model=list[experiment.Experiment],
-    response_model_exclude_none=True,
-)
-def list_experiments(
-    *,
-    editable: Optional[bool] = None,
-    q: Optional[str] = None,
-    db: Session = Depends(deps.get_db),
-    user_data: Optional[UserData] = Depends(get_current_user),
-) -> list[Experiment]:
-    """
-    List experiments.
-    """
-    query = db.query(Experiment)
-    if q is not None:
-        save_to_logging_context({"query_string": q})
-
-        if user_data is None or user_data.user is None:
-            logger.debug(msg="User is anonymous; Cannot list their experiments.", extra=logging_context())
-            return []
-
-        if len(q) > 0:
-            logger.debug(msg="Listing experiments for the current user.", extra=logging_context())
-            query = query.filter(
-                Experiment.created_by_id == user_data.user.id
-            )  # .filter(Experiment.published_date is None)
-        # else:
-        #     query = query.filter(Experiment.created_by_id == user.id).filter(Experiment.published_date is None)
-    else:
-        logger.debug(msg="No query string was provided; Listing all experiments.", extra=logging_context())
-
-    items = query.order_by(Experiment.urn).all()
-    return items
-
-
 @router.post(
     "/experiments/search",
     status_code=200,

src/mavedb/view_models/search.py

@@ -11,6 +11,7 @@ class ExperimentsSearch(BaseModel):
     publication_identifiers: Optional[list[str]]
     keywords: Optional[list[str]]
     text: Optional[str]
+    meta_analysis: Optional[bool]
 
 
 class ScoreSetsSearch(BaseModel):