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is shorah same as lofreq?

Status: Open.

#87 In cbg-ethz/shorah;

· ibseq opened on Aug 31, 2022

Smalt command not found

Status: Open.

#85 In cbg-ethz/shorah;

· Ruchank1 opened on Nov 19, 2021

Error running Amplicon with diversity option

Status: Open.

#83 In cbg-ethz/shorah;

· XU-Nuo opened on May 24, 2021

UnboundLocalError: local variable 'new_clusters' referenced before assignment

Status: Open.

#82 In cbg-ethz/shorah;

· bernt-matthias opened on Mar 16, 2021

Shorah: UnboundLocalError: local variable 'end' referenced before assignment

Status: Open.

#78 In cbg-ethz/shorah;

· ptapiaisp opened on Aug 3, 2020

Conda package: no version file

Status: Open.

#76 In cbg-ethz/shorah;

· stefanches7 opened on Jul 3, 2020

ShoRAH: Illumina reads ; influenza

Status: Open.

#75 In cbg-ethz/shorah;

· LauraVP1994 opened on Jul 3, 2020

Conda package for 1.99 not working properly

Status: Open.

#72 In cbg-ethz/shorah;

· heylf opened on May 12, 2020

output interpretation

Status: Open.

#66 In cbg-ethz/shorah;

· KabitaBaral1 opened on Oct 30, 2019

Long reads - nanopore

Status: Open.

#63 In cbg-ethz/shorah;

· Psy-Fer opened on Sep 3, 2019

Error running Shorah.py, and seeking for help

Status: Open.

#61 In cbg-ethz/shorah;

· JingniHe opened on Jun 1, 2019

results not reproducible even random seed '-S' is set

Status: Open.

#59 In cbg-ethz/shorah;

· jeffchen2000 opened on Dec 8, 2018