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18eeb7d
Merge remote-tracking branch 'cpp-lln-lab/master'
marcobarilari Jun 4, 2020
66f2ab7
add local path
marcobarilari Jun 4, 2020
671ae06
add local path
marcobarilari Jun 4, 2020
977bd57
Merge remote-tracking branch 'cpp-lln-lab/master'
marcobarilari Sep 27, 2020
803c3a1
Merge remote-tracking branch 'cpp-lln-lab/master'
marcobarilari Nov 1, 2020
b1c0644
Merge remote-tracking branch 'cpp-lln-lab/master'
marcobarilari Nov 23, 2020
a354e69
Merge remote-tracking branch 'cpp-lln-lab/master'
marcobarilari Feb 8, 2021
0594d46
add chagelog CI script
marcobarilari Feb 8, 2021
afdfe46
add code
marcobarilari Feb 8, 2021
740df0a
Merge branch 'marco_changelog-CI'
marcobarilari Feb 8, 2021
dfc94f4
add mock change
marcobarilari Feb 8, 2021
93eee2d
update changelog workflow
marcobarilari Feb 8, 2021
1cb524b
fix typo
marcobarilari Feb 8, 2021
a58ba34
fix syntax
marcobarilari Feb 8, 2021
9a18962
fix CI error
marcobarilari Feb 8, 2021
46fe7be
Merge branch 'marco-dev-CI-test'
marcobarilari Feb 8, 2021
7622951
Merge remote-tracking branch 'cpp-lln-lab/main'
marcobarilari Feb 8, 2022
20d3eae
saved UNDO information for reset changes and discarded files
marcobarilari Feb 25, 2025
2a37627
Merge remote-tracking branch 'origin/master'
marcobarilari Feb 25, 2025
e74704a
update bids-matlab submodule to latest commit in main
marcobarilari Feb 25, 2025
3f5bcd7
update gitmodule file to track main branch in bids-matlab
marcobarilari Feb 25, 2025
73f6750
rm files we do not know where they are coming from
marcobarilari Feb 25, 2025
ae9d4e1
add defaults for transparent plots
marcobarilari Mar 5, 2025
ef178fc
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 5, 2025
0df95b2
Merge branch 'main' into marco_defaults-transparent-plots
Remi-Gau Mar 5, 2025
b2e2672
Update src/defaults/defaultResultsStructure.m
Remi-Gau Mar 5, 2025
88a9ab5
Update src/defaults/defaultResultsStructure.m
Remi-Gau Mar 5, 2025
f1da896
assign the sd structures to the result one
marcobarilari Mar 5, 2025
96ea3e4
fix
Remi-Gau Mar 5, 2025
94309cb
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 5, 2025
c6ad77f
add test and update
Remi-Gau Mar 5, 2025
c1cd293
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Mar 5, 2025
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31 changes: 31 additions & 0 deletions src/defaults/defaultResultsStructure.m
Original file line number Diff line number Diff line change
Expand Up @@ -23,4 +23,35 @@

result.nidm = true();

% transparent plot
layers{1} = struct('color', struct('file', result.montage.background, ...
'range', [0 1], ...
'map', gray(256)));

% color_map_folder = fullfile(fileparts(which('map_luminance')), '..', 'mat_maps');
% load(fullfile(color_map_folder, 'diverging_bwr_iso.mat'));

layers{2} = struct('color', struct('file', [], ... % con image
'map', 'diverging_bwr_iso', ...
'range', [-4 4]), ...
'label', '\beta_{listening} - \beta_{baseline} (a.u.)', ...
'opacity', struct('file', [], ... % spmT image
'range', [2 3], ...
'label', '| t |'));

layers{3} = struct('color', struct('file', [], ... % spmT mask thresholded at 0.05 FWD
'map', [0 0 0], ...
'line_width', 2));

result.sdConfig.layers = layers;

settings = sd_config_settings('init');

settings.slice.orientation = result.montage.orientation;
settings.slice.disp_slices = -50:10:50;
settings.fig_specs.n.slice_column = 4;
settings.fig_specs.title = [];

result.sdConfig.settings = settings;

end
29 changes: 29 additions & 0 deletions tests/tests_defaults/test_defaultResultsStructure.m
Original file line number Diff line number Diff line change
Expand Up @@ -37,6 +37,35 @@ function test_defaultResultsStructure_basic()

expected.nidm = true();

layers{1} = struct('color', struct('file', expected.montage.background, ...
'range', [0 1], ...
'map', gray(256)));

layers{2} = struct('color', struct('file', [], ... % con image
'map', 'diverging_bwr_iso', ...
'range', [-4 4]), ...
'label', '\beta_{listening} - \beta_{baseline} (a.u.)', ...
'opacity', struct('file', [], ... % spmT image
'range', [2 3], ...
'label', '| t |'));

layers{3} = struct('color', struct('file', [], ... % spmT mask thresholded at 0.05 FWD
'map', [0 0 0], ...
'line_width', 2));

expected.sdConfig.layers = layers;

settings = sd_config_settings('init');

settings = sd_config_settings('init');

settings.slice.orientation = expected.montage.orientation;
settings.slice.disp_slices = -50:10:50;
settings.fig_specs.n.slice_column = 4;
settings.fig_specs.title = [];

expected.sdConfig.settings = settings;

assertEqual(results, expected);

end
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