Upgrade MessagePack to v3 to support AOT

.github/contributors/asus4.md

@@ -0,0 +1,105 @@
+# _**catalyst**_ contributor agreement
+
+This _**catalyst**_  Contributor Agreement (**"CA"**), is based on the
+[Oracle Contributor Agreement](http://www.oracle.com/technetwork/oca-405177.pdf).
+The CA applies to any contribution that you make to any product or project
+managed by us (the **"project"**), and sets out the intellectual property rights
+you grant to us in the contributed materials. The term **"us"** shall mean
+[Curiosity GmbH](https://curiosity.ai/). The term
+**"you"** shall mean the person or entity identified below.
+
+If you agree to be bound by these terms, fill in the information requested
+below and include the filled-in version with your first pull request, under the
+folder [`.github/contributors/`](/.github/contributors/). The name of the file
+should be your GitHub username, with the extension `.md`. For example, the user
+example_user would create the file `.github/contributors/example_user.md`.
+
+Read this agreement carefully before signing. These terms and conditions
+constitute a binding legal agreement.
+
+## Contributor Agreement
+
+1. The term "contribution" or "contributed materials" means any source code,
+object code, patch, tool, sample, graphic, specification, manual,
+documentation, or any other material posted or submitted by you to the project.
+
+2. With respect to any worldwide copyrights, or copyright applications and
+registrations, in your contribution:
+
+    * you hereby assign to us joint ownership, and to the extent that such
+    assignment is or becomes invalid, ineffective or unenforceable, you hereby
+    grant to us a perpetual, irrevocable, non-exclusive, worldwide, no-charge,
+    royalty-free, unrestricted license to exercise all rights under those
+    copyrights. This includes, at our option, the right to sublicense these same
+    rights to third parties through multiple levels of sublicensees or other
+    licensing arrangements;
+
+    * you agree that each of us can do all things in relation to your
+    contribution as if each of us were the sole owners, and if one of us makes
+    a derivative work of your contribution, the one who makes the derivative
+    work (or has it made will be the sole owner of that derivative work;
+
+    * you agree that you will not assert any moral rights in your contribution
+    against us, our licensees or transferees;
+
+    * you agree that we may register a copyright in your contribution and
+    exercise all ownership rights associated with it; and
+
+    * you agree that neither of us has any duty to consult with, obtain the
+    consent of, pay or render an accounting to the other for any use or
+    distribution of your contribution.
+
+3. With respect to any patents you own, or that you can license without payment
+to any third party, you hereby grant to us a perpetual, irrevocable,
+non-exclusive, worldwide, no-charge, royalty-free license to:
+
+    * make, have made, use, sell, offer to sell, import, and otherwise transfer
+    your contribution in whole or in part, alone or in combination with or
+    included in any product, work or materials arising out of the project to
+    which your contribution was submitted, and
+
+    * at our option, to sublicense these same rights to third parties through
+    multiple levels of sublicensees or other licensing arrangements.
+
+4. Except as set out above, you keep all right, title, and interest in your
+contribution. The rights that you grant to us under these terms are effective
+on the date you first submitted a contribution to us, even if your submission
+took place before the date you sign these terms.
+
+5. You covenant, represent, warrant and agree that:
+
+    * Each contribution that you submit is and shall be an original work of
+    authorship and you can legally grant the rights set out in this CA;
+
+    * to the best of your knowledge, each contribution will not violate any
+    third party's copyrights, trademarks, patents, or other intellectual
+    property rights; and
+
+    * each contribution shall be in compliance with U.S. export control laws and
+    other applicable export and import laws. You agree to notify us if you
+    become aware of any circumstance which would make any of the foregoing
+    representations inaccurate in any respect. We may publicly disclose your
+    participation in the project, including the fact that you have signed the CA.
+
+6. This CA is governed by the laws of the Federal Republic of Germany. Any choice of law rules will not apply.
+
+7. Please place an “x” on one of the applicable statement below. Please do NOT
+mark both statements:
+
+    * [X] I am signing on behalf of myself as an individual and no other person
+    or entity, including my employer, has or will have rights with respect to my
+    contributions.
+
+    * [ ] I am signing on behalf of my employer or a legal entity and I have the
+    actual authority to contractually bind that entity.
+
+## Contributor Details
+
+| Field                          | Entry                |
+|------------------------------- | -------------------- |
+| Name                           | Koki Ibukuro         |
+| Company name (if applicable)   |                      |
+| Title or role (if applicable)  |                      |
+| Date                           | 18/04/2025           |
+| GitHub username                | asus4                |
+| Website (optional)             |                      |

Catalyst/Catalyst.csproj

@@ -29,7 +29,7 @@
   <ItemGroup>
     <PackageReference Include="HtmlAgilityPack" Version="1.11.71" />
     <PackageReference Include="Microsoft.ML" Version="4.0.0" />
-    <PackageReference Include="MessagePack" Version="2.5.192" />
+    <PackageReference Include="MessagePack" Version="3.1.3" />
     <PackageReference Include="Microsoft.Recognizers.Text.DateTime" Version="1.8.10" />
     <PackageReference Include="NuGet.CommandLine" Version="6.12.1">
       <PrivateAssets>all</PrivateAssets>

Catalyst/src/Base/Document.cs

@@ -19,7 +19,7 @@ namespace Catalyst
 
     [JsonObject]
     [MessagePackObject]
-    public class Document : IDocument
+    public partial class Document : IDocument
     {
         [Key(0)] public Language Language { get; set; }
         [Key(1)] public string Value { get; set; }

Catalyst/src/Base/EntityType.cs

@@ -7,7 +7,7 @@ namespace Catalyst
 {
     [JsonObject]
     [MessagePackObject]
-    public struct EntityType
+    public partial struct EntityType
     {
         [Key(0)] public string Type { get; set; }
         [Key(1)] public EntityTag Tag { get; set; }

Catalyst/src/Base/SingleToken.cs

@@ -6,8 +6,8 @@
 
 namespace Catalyst
 {
-    [MessagePackObject]
-    public class SingleToken : IToken
+    [MessagePackObject(true)]
+    public partial class SingleToken : IToken
     {
         [Key(0)] public string Value { get; set; }
         [Key(1)] public int Hash { get; set; }

Catalyst/src/Base/TokenData.cs

@@ -3,7 +3,7 @@
 namespace Catalyst
 {
     [MessagePackObject]
-    public struct TokenData
+    public partial struct TokenData
     {
         [IgnoreMember] public int LowerBound;
         [IgnoreMember] public int UpperBound;

Catalyst/src/Base/TokenizationException.cs

@@ -3,7 +3,7 @@
 namespace Catalyst
 {
     [MessagePackObject]
-    public struct TokenizationException
+    public partial struct TokenizationException
     {
         [Key(0)] public string[] Replacements;
 

Catalyst/src/Interfaces/TrainingUpdate.cs

@@ -5,7 +5,7 @@
 namespace Catalyst
 {
     [MessagePackObject(keyAsPropertyName:true)]
-    public class TrainingHistory
+    public partial class TrainingHistory
     {
         public List<TrainingUpdate> History { get; set; } = new List<TrainingUpdate>();
         public TimeSpan ElapsedTime { get; set; }
@@ -17,7 +17,7 @@ public void Append(TrainingUpdate update)
     }
 
     [MessagePackObject]
-    public class TrainingUpdate : EventArgs
+    public partial class TrainingUpdate : EventArgs
     {
         [Key(0)] public float Progress { get; set; }
         [Key(1)] public float Epoch { get; set; }

Catalyst/src/Models/Base/AveragePerceptronTagger.cs

@@ -14,7 +14,8 @@
 
 namespace Catalyst.Models
 {
-    public class AveragePerceptronTaggerModel : StorableObjectData
+    [MessagePackObject(keyAsPropertyName: true)]
+    public partial class AveragePerceptronTaggerModel : StorableObjectData
     {
         public Dictionary<int, float[]> Weights { get; set; } = new Dictionary<int, float[]>();
         public Dictionary<int, int> TokenToSingleTag { get; set; } = new Dictionary<int, int>();

Catalyst/src/Models/Base/Lookups.cs

@@ -9,7 +9,7 @@
 namespace Catalyst.Models
 {
     [MessagePackObject]
-    public class Lookups
+    public partial class Lookups
     {
         internal static readonly MessagePackSerializerOptions LZ4Standard = MessagePackSerializerOptions.Standard.WithCompression(MessagePackCompression.Lz4Block);
 
@@ -27,7 +27,7 @@ public Lookups(string name, Language language, string cache, Dictionary<ulong, E
         [Key(3)] public Dictionary<ulong, Entry> Entries { get; set; }
 
         [MessagePackObject]
-        public struct Entry
+        public partial struct Entry
         {
             public Entry(byte length, uint begin)
             {

Catalyst/src/Models/Embeddings/FastText/FastText.Entry.cs

@@ -6,7 +6,7 @@ namespace Catalyst.Models
     public partial class FastText
     {
         [MessagePackObject]
-        public struct Entry
+        public partial struct Entry
         {
             [Key(0)] public string Word;
             [Key(1)] public long Count;

Catalyst/src/Models/Embeddings/FastText/FastText.Line.cs

@@ -5,7 +5,7 @@ namespace Catalyst.Models
     public partial class FastText
     {
         [MessagePackObject]
-        public struct Line
+        public partial struct Line
         {
             [Key(0)] public int[] EntryIndexes;
             [Key(1)] public int[] Labels;

Catalyst/src/Models/EntityRecognition/PatternSpotter.cs

@@ -132,7 +132,7 @@ public void RemovePattern(string name)
     }
 
     [MessagePackObject]
-    public class MatchingPattern
+    public partial class MatchingPattern
     {
         [Key(0)] public List<PatternUnit[]> Patterns { get; set; } = new List<PatternUnit[]>();
         [Key(1)] public string Name { get; set; }
@@ -243,7 +243,7 @@ public MatchingPattern Add(params PatternUnit[] units)
     }
 
     [MessagePackObject]
-    public class PatternUnit
+    public partial class PatternUnit
     {
         [Key(0)] public PatternMatchingMode Mode { get; set; }
         [Key(1)] public bool Optional { get; set; }
@@ -652,7 +652,7 @@ private bool MatchIsClosingParenthesis(ref Token token)
 
     //Used to serialize the pattern spotter model data for the front-end
     [MessagePackObject(keyAsPropertyName: true)]
-    public class PatternSpotterData
+    public partial class PatternSpotterData
     {
         public StoredObjectInfo Model { get; set; }
         public string CaptureTag { get; set; }

Catalyst/src/Models/EntityRecognition/Spotter.cs

@@ -458,7 +458,7 @@ public void AppendList(IEnumerable<string> words)
     }
 
     [MessagePack.MessagePackObject(keyAsPropertyName: true)]
-    public class Word2SenseTrainingData
+    public partial class Word2SenseTrainingData
     {
         public Dictionary<ulong, int> HashCount { get; set; } = new Dictionary<ulong, int>();
         public Dictionary<ulong, ulong[]> Senses { get; set; } = new Dictionary<ulong, ulong[]>();

Catalyst/src/Models/Special/AbbreviationCapturer.cs

@@ -326,7 +326,7 @@ private static bool IsSubSequenceOf(ReadOnlySpan<char> inner, ReadOnlySpan<char>
     }
 
     [MessagePackObject(keyAsPropertyName: true)]
-    public class AbbreviationCandidate
+    public partial class AbbreviationCandidate
     {
         public string Abbreviation { get; set; }
         public string Description { get; set; }