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Refactoring for interface discontinuities #944

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Refactoring for interface discontinuities #944

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dd9e997
everything in the same file
RemDelaporteMathurin Feb 18, 2025
150f878
consistent naming
RemDelaporteMathurin Feb 18, 2025
0731b95
consistent naming 2
RemDelaporteMathurin Feb 18, 2025
280eeb0
merged classes
RemDelaporteMathurin Feb 18, 2025
8b6a6bb
default value
RemDelaporteMathurin Feb 18, 2025
c2516b1
penalty default
RemDelaporteMathurin Feb 18, 2025
d14e191
removed special class for species
RemDelaporteMathurin Feb 18, 2025
74f911d
add default PETSc options and refactor petsc_options handling
RemDelaporteMathurin Feb 18, 2025
65a973b
removed some duplicated code
RemDelaporteMathurin Feb 18, 2025
a23d5e6
remove dead code
RemDelaporteMathurin Feb 18, 2025
867e79b
Merge branch 'fenicsx' into refactore-discontinuities
RemDelaporteMathurin Apr 4, 2025
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3 changes: 2 additions & 1 deletion examples/multi_material_1d.py
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,8 @@

import festim as F

my_model = F.HTransportProblemDiscontinuous()
my_model = F.HydrogenTransportProblemDiscontinuous()
my_model.method_interface = "nietsche"

interface_1 = 0.5
interface_2 = 0.7
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3 changes: 2 additions & 1 deletion examples/multi_material_2d.py
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Expand Up @@ -63,7 +63,8 @@ def half(x):

mesh, mt, ct = generate_mesh()

my_model = F.HTransportProblemDiscontinuous()
my_model = F.HydrogenTransportProblemDiscontinuous()
my_model.method_interface = "nietsche"
my_model.mesh = F.Mesh(mesh)
my_model.volume_meshtags = ct
my_model.facet_meshtags = mt
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3 changes: 2 additions & 1 deletion examples/multi_material_2d_bis.py
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Expand Up @@ -63,7 +63,8 @@ def half(x):

mesh, mt, ct = generate_mesh()

my_model = F.HTransportProblemDiscontinuous()
my_model = F.HydrogenTransportProblemDiscontinuous()
my_model.method_interface = "nietsche"
my_model.mesh = F.Mesh(mesh)
my_model.volume_meshtags = ct
my_model.facet_meshtags = mt
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3 changes: 2 additions & 1 deletion examples/multi_material_transient.py
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Expand Up @@ -2,7 +2,8 @@

import festim as F

my_model = F.HTransportProblemDiscontinuous()
my_model = F.HydrogenTransportProblemDiscontinuous()
my_model.method_interface = "nietsche"

interface_1 = 0.5
interface_2 = 0.7
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4 changes: 2 additions & 2 deletions examples/multi_material_with_one_material.py
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Expand Up @@ -2,8 +2,8 @@

import festim as F

my_model = F.HTransportProblemDiscontinuous()

my_model = F.HydrogenTransportProblemDiscontinuous()
my_model.method_interface = "nietsche"

N = 1500
vertices = np.linspace(0, 1, num=N)
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6 changes: 3 additions & 3 deletions src/festim/__init__.py
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Expand Up @@ -46,9 +46,9 @@
get_interpolation_points,
)
from .hydrogen_transport_problem import (
HTransportProblemDiscontinuous,
HTransportProblemPenalty,
HydrogenTransportProblemDiscontinuous,
HydrogenTransportProblem,
HydrogenTransportProblemDiscontinuousChangeVar,
)
from .initial_condition import (
InitialCondition,
Expand All @@ -64,7 +64,7 @@
from .reaction import Reaction
from .settings import Settings
from .source import HeatSource, ParticleSource, SourceBase
from .species import ImplicitSpecies, Species, SpeciesChangeVar, find_species_from_name
from .species import ImplicitSpecies, Species, find_species_from_name
from .stepsize import Stepsize
from .subdomain.interface import Interface
from .subdomain.surface_subdomain import SurfaceSubdomain, find_surface_from_id
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