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kellrott merged 1 commit into from
Aug 19, 2025
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Add in new kubernetes service and archived azure tes #239

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7 changes: 4 additions & 3 deletions README.md
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Expand Up @@ -84,21 +84,22 @@ handling personal data.
### Server
- [Funnel](https://ohsu-comp-bio.github.io/funnel/)
- [TESK](https://github.com/EMBL-EBI-TSI/TESK)
- [TES Azure](https://github.com/microsoft/ga4gh-tes)
- [TES Azure](https://github.com/microsoft/ga4gh-tes) **Archived**
- [Pulsar](https://pulsar.readthedocs.io/)
- [proTES](https://github.com/elixir-cloud-aai/proTES)
- [Poiesis](https://github.com/JaeAeich/poiesis)

### Compatibility Matrix

> Compatibility is assumed based on available documentation and limited tests
> performed on latest versions of implementations available in December 2020.
> performed on latest versions of implementations available in August 2023.
> Information may be outdated.

| | cwl-tes | Cromwell | Nextflow | Snakemake |
| ----------- | ------------- | --------- | ---------| --------- |
| **Funnel** | [Compatible](https://github.com/ohsu-comp-bio/cwl-tes) | Compatible | [Compatible](https://www.nextflow.io/docs/latest/executor.html#ga4gh-tes) | [Compatible](https://snakemake.readthedocs.io/en/stable/executing/cloud.html#executing-a-snakemake-workflow-via-ga4gh-tes) |
| **TESK** | [Compatible](https://github.com/ohsu-comp-bio/cwl-tes/pull/25) | [Compatible](https://cromwell.readthedocs.io/en/stable/backends/TES/) | [Compatible](https://github.com/EMBL-EBI-TSI/tesk-core/pull/19) | [Compatible](https://github.com/EMBL-EBI-TSI/tesk-core/pull/19) | [Compatible](https://github.com/elixir-cloud-aai/demo-tes-hybrid-cloud/tree/main) |
| **TES Azure** | Not tested | [Compatible](https://github.com/microsoft/CromwellOnAzure) | [Compatible](https://www.nextflow.io/docs/stable/executor.html#ga4gh-tes) | [Compatible](https://github.com/microsoft/ga4gh-tes/blob/main/snakemake/examples/snakemake/README.md) |
| **TES Azure (Archived)** | Not tested | [Compatible](https://github.com/microsoft/CromwellOnAzure) | [Compatible](https://www.nextflow.io/docs/stable/executor.html#ga4gh-tes) | [Compatible](https://github.com/microsoft/ga4gh-tes/blob/main/snakemake/examples/snakemake/README.md) |


TES Service Examples
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