fix: resolve macOS setup compatibility and add documentation commit step (fixes #11, #16)

[Ashwinhegde19]

Summary

This PR addresses two critical bugs affecting user experience:

1. macOS/BSD setup failure - Users on macOS cannot use /conductor:setup due to token limit errors
2. Missing documentation commits - Documentation updates after track completion are not automatically committed

Changes

1. Fix macOS/BSD compatibility in setup.toml (Issue #11)

• Problem: The ls -lR -I 'node_modules' command fails silently on macOS/BSD systems because the -I flag is not supported. This causes node_modules and other directories to be scanned, leading to API token limit errors.
• Solution: Replace with cross-platform find command that works on all systems:

  find . -type d \( -name 'node_modules' -o -name '.m2' -o -name 'build' -o -name 'dist' -o -name 'bin' -o -name 'target' -o -name '.git' -o -name '.idea' -o -name '.vscode' -o -name '__pycache__' \) -prune -o -type f -print | head -200

• Additional improvement: Added __pycache__ to exclusion list
• Impact: macOS users can now successfully run /conductor:setup without hitting token limits

2. Add automatic documentation commit step in implement.toml (Issue #16)

• Problem: After implementing a track, documentation synchronization updates product.md, tech-stack.md, and product-guidelines.md, but these changes are not committed automatically. Users must manually commit these files.
• Solution: Added new section 7 "Commit Documentation Updates" in implement.toml:
  • Checks if documentation files were modified during synchronization
  • Automatically commits changes with format: conductor(doc-sync): Update documentation for '<track_description>'
  • Skips commit step if no changes were made
• Section renumbering: Renamed section 7 to 8 (TRACK CLEANUP) and updated execution trigger to include commit requirement
• Impact: Documentation changes are now automatically committed after track completion, completing the workflow

Testing

Both fixes have been tested and work as expected:

1. Setup on macOS/BSD now respects directory exclusions
2. Documentation updates are committed with proper messages

Fixes

• Closes /conductor setup fails with "token count exceeds maximum" (400) on large repositories #11 - Scanning entire node_modules causing 400 API Error
• Closes Uncommitted files after implementing a track #16 - Uncommitted files after implementing a track

[sherzat3]

Hey @Ashwinhegde19 , thanks for the PR! Good catch on the macOS/BSD incompatibility. On the the missing documentation commit, we actually already fixed that in PR #48.

Feel free to pull the latest changes and update this PR to include only the macOS/BSD compatibility fix, or submit a fresh PR if that's easier.

[sherzat3]

Fresh PR with the requested changes was started in #56. Closing this PR.