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Hi @akmorrow13, tfmodisco-lite has been merged into the official TF-MoDISco repository. We encourage you to re-open your PR there. |
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This code accounts for cases where sequences in the one hot encodings are variable length. In these cases, we don't include seqlets that don't overlap any bp for a sequence. Note that this will still include seqlets that overhang off the end of the sequence (ie a seqlet ATGCNNNNNNNN would be valid)